Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11808g00001 ATGCACTCAAAGCAGCAGCTCCTTCTTCTTCTTCTGCTTCTGGCCATCCTCATGGTCATGGCAGCAGAAGCAGCACCACAGCAGCCCTTTCGAAACTGTACAACAAACTGCGGCTCCCTCCAAATTCCCTACCCATTTGGGACAACCGAAGGCTGCTACCTCGACACCTCATTTCTCATCACGTGCAACCAAACCAATCCACGTGCACCTGCCACTCCATTCTTGCGACGCAGCAATATCATAAACGTACTAAGCATTTCACTCGACGGCGAATTGCGGATCTCGTTGGGCATTGCCAAAGACTGCTACAGGGCTAGCGGCAAACTTATCGATAGGAACAGTAACGGGCTCAACCTGACGCATTTTTACTTCTCCTCGACGAGAAACATATTCACGGCAATTGGTTGCGACTCACTCGGATTATTCAGTGGCTGGGCTTCCCAGGAAAGGAACTACACAACTGGGTGCGTGTCTTTGTGCAACAGACTTGACGACATCGTGGGAGCTAACGGTTCATGCTCTGGCATTGGCTGTTGCGAGACTCCCATACCCAAAGGACTATACACGGTTGGTTTCAGTTCTAGTAGCGCGGAAAATAACCACACCAGCGTGCACGACTTCAACCCGTGTGGTTATGCGTTTCTCGTGGAACAAGGAGCTTACTCTTTCTCGTCCACGGATTTGGAAAACCTTACCCAGACAACGTTCCCGGTCGTGCTTGATTGGGCAGTGGGAAACCTCACGTGCGAAGAAGCTCAGAGGAACCTTTCCAGCTATGCCTGTGTCGCCAAAAACAGTTACTGTTATAATTCAACCAATGCACCTGGTTACCGTTGCAACTGCTCTCATGGTTTTCAGGGAAATCCTTACCTTCTTCATGGCTGTGTAGACATTAATCAATGTTTGGAATCAAACGATTGCATTAGTGAAGCAAAATGCCAAAATTTTCGTGGGGGCTACAATTGTTCGTGTCCCGAAGGACAAGAAGGAGATGGGAAAATTCACGGAACAGGGTGTCAGCCTAACTCAAATTCTAATTCCCGAACAATTTCCATATTGGTAATTGCTTTGAGTGTGAGTGTAAGTGTCTTAGCACTACTTTTGGGTAGCTTTTATGCGTATTGGGGGATGAAGAAAAGAAAGGTCCTTAAACTGAGGCAAAACTTTTTTCTACAAAATGGTGGCATATTGTTACAACAACGAATTGCCAATCAAAGAAGCTCAAGTTCAATTGAAACAGCCAAAGTTTTTACTGTGGAGGAACTCAAGAAGGCCACCAACAACTTTGATGAAGGAAGAATCCTTGGCCAAGGTGGCTATGGAACAGTATACAAAGGAGTATTACCAAGCAATAAAATAGTAGCCATAAAAAAGTCTAAAATTGGTGACCTTGGCCAAATTGAGCAATTCATTAATGAGGTAGTTGTGCTTTCCCAAATCAACCATAGGAATGTGGTAAAGCTCTTAGGTTGTTGTTTAGAAACAGAAGTCCCCCTACTTGTTTATGAATTCATTCCTAATGGTACCATTTCTGAGCATCTTTATAACCAAGGACCATCTTCAAGACTCTCTTGGATAACACGATTTAGAATAGCAACAGAAACTGCAAGTGCCCTTGCATACTTGCACTCTGCTACTTCTACACCTATCATACACCGAGATGTGAAAACTACTAATATACTACTAGATTCTGATCTTACTGCAAAAGTTTCTGATTTTGGAGCTTCAAGACTTGTTCCTCTAGATCAAACTCAATTAACAACTTTAGTGCAAGGGACATTAGGGTATCTAGACCCTGAATACTTTCACACGAGCCAATTAACTGACAAGAGTGATGTGTATAGCTTTGGTGTTGTTCTGGCAGAGTTACTCACAGGTATGAAGGCCCTTTCTTTCAACAGACCTGAGAGTGATAGAAATTTATCAGTGTTCTTTGTTACTTCAGTGGAAAAAGGTCAATTACTTAGCATTATTGATAAACACATAATACACGAGGCAAATATTGAGCAACTAATAGAAGTTGCTAATATTGCAAAACATTGTTTATCTGTTTTGGGGGAGGACAGACCTACCATGAAGGAAGTGGAAATGAAATTAGAAGCACTAAGAATAATGGGAAAGAATCGATGGGAAAATGTCAATGTATCGTCGGATGAGACAGAATACTTGCTCAGTGAAGACTTGTATCCTTACGATGTTAGCATCGAACATAAGACAACAATGGGATTGAAGGCCACACAGATGCAACTGACCCTGGTGTTGCTTATTGGGTTAGCAGCAGCTGACCAAGCCCTGCCCGGCTGCCCAAACACTTGTGGAAGTGTTTCAGTTCCATATCCATTTGGCATAGGTTCTGCCAACGGTAACAACTGTTTCTTCGAGGAAGCATTAGAGCTTACTTGCAAAAACTCCAATTTATTTCGCGGTAACGGTAACGTCCAAATCTTGAGTATTGCCCTGGATGGTAAAATGGACATGTTTTTGGATATATCCCAGGCTTGCAAAATTGAATCGCATAGTGGACAAGTAGATGGTAACACAATCACTCTCAGAACTCCAGCTTTTGCAATTTCTAGCGAGGACAACAAGTTCGTAAGTGTTGGCTGCGACACTTATGGCTATCTCAACAGTTTTCGCAACGGTAGCAGATATTCAATCGGATGCTTGACAAGATGCGATAGTGAAGAGAGTATGCAAAGCATACAGAGAGATGGAAACTGTACGGGTATTGGGTGTTGCCAGGTGGACATACCTCCCGGAATGAAGAATATTAGCATACAAGCATTCAGCTTTAACAATTTCAATTCCTCTTACCTCTTCAACAACTGCAGCTATTCCTTTGTTGTCAAAAATGGCAACTATACTTTCTCGCTGGATCATTTAAACAAGTTGCCCTTCCAGCAGGCACCCTTTGTCGTTCATTGGACCGTTGGAAACGACACGTGTCAAATTTCAAAAGGTAAGCCCGACTATGCGTGCAAGAATAATAGCGATTGTGAGGACTCACCCACTGGATATGGTTACCGATGCCAATGTAAACAAGGTTTTGACGGAAACCCATACCATCCCGATGGTTGCCGAGATATAGAGGAATGTAAGATGGGCACACACAATTGCATAAGTGAACAGAATTGTCGTGAAACCGAAGGGTCTTTCGAATGTTTCTGTCCTGAAGGACAATTCGGAAATGGAACAAGAGTTGGCGGAGGATGCCATCAAAGGCAGCCACATGATGTATTTCCCAAGGTCACCATTGGCGTAGGTGTAGGAGTAACTGCTCTATTTATTGGGACTTCTTGGTTATACTTGATATACCAAAAAAGGAAACTCATCAAATTAAAGGAGAAGTTCTTTCAGCAAAATGGTGGTATGATTCTGAAACAGCAACTCTCTGCAAGAGAACACCCGTCTCAATTCTCTGCAAGAGAACACTCATCTCAATCCACTACAATTTTCACTGCAAAGCAACTTAAGAAAGCAACCAACAATTTTGATGAGAACCTAATTATCGGTAAAGGAGGTTATGGTACAGTTTTCAAAGGATTTCTCTCAGATAACAAGATTGTCGCTATCAAAAAGTCCAAAATAGTGGATCACAGCCAAGTCGAGCAATTCGTTAATGAAGTCGTTGTACTATCACAAATTAATCACAGGAATGTGGTCAAACTCTTGGGTTGTTGTTTAGAGACAGAAGTTCCTTTACTG 3705 0.4273 MHSKQQLLLLLLLLAILMVMAAEAAPQQPFRNCTTNCGSLQIPYPFGTTEGCYLDTSFLITCNQTNPRAPATPFLRRSNIINVLSISLDGELRISLGIAKDCYRASGKLIDRNSNGLNLTHFYFSSTRNIFTAIGCDSLGLFSGWASQERNYTTGCVSLCNRLDDIVGANGSCSGIGCCETPIPKGLYTVGFSSSSAENNHTSVHDFNPCGYAFLVEQGAYSFSSTDLENLTQTTFPVVLDWAVGNLTCEEAQRNLSSYACVAKNSYCYNSTNAPGYRCNCSHGFQGNPYLLHGCVDINQCLESNDCISEAKCQNFRGGYNCSCPEGQEGDGKIHGTGCQPNSNSNSRTISILVIALSVSVSVLALLLGSFYAYWGMKKRKVLKLRQNFFLQNGGILLQQRIANQRSSSSIETAKVFTVEELKKATNNFDEGRILGQGGYGTVYKGVLPSNKIVAIKKSKIGDLGQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTISEHLYNQGPSSRLSWITRFRIATETASALAYLHSATSTPIIHRDVKTTNILLDSDLTAKVSDFGASRLVPLDQTQLTTLVQGTLGYLDPEYFHTSQLTDKSDVYSFGVVLAELLTGMKALSFNRPESDRNLSVFFVTSVEKGQLLSIIDKHIIHEANIEQLIEVANIAKHCLSVLGEDRPTMKEVEMKLEALRIMGKNRWENVNVSSDETEYLLSEDLYPYDVSIEHKTTMGLKATQMQLTLVLLIGLAAADQALPGCPNTCGSVSVPYPFGIGSANGNNCFFEEALELTCKNSNLFRGNGNVQILSIALDGKMDMFLDISQACKIESHSGQVDGNTITLRTPAFAISSEDNKFVSVGCDTYGYLNSFRNGSRYSIGCLTRCDSEESMQSIQRDGNCTGIGCCQVDIPPGMKNISIQAFSFNNFNSSYLFNNCSYSFVVKNGNYTFSLDHLNKLPFQQAPFVVHWTVGNDTCQISKGKPDYACKNNSDCEDSPTGYGYRCQCKQGFDGNPYHPDGCRDIEECKMGTHNCISEQNCRETEGSFECFCPEGQFGNGTRVGGGCHQRQPHDVFPKVTIGVGVGVTALFIGTSWLYLIYQKRKLIKLKEKFFQQNGGMILKQQLSAREHPSQFSAREHSSQSTTIFTAKQLKKATNNFDENLIIGKGGYGTVFKGFLSDNKIVAIKKSKIVDHSQVEQFVNEVVVLSQINHRNVVKLLGCCLETEVPLL 1235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11808g00001 1235 Pfam Calcium-binding EGF domain 297 329 IPR001881 GO:0005509
Mupr11808g00001 1235 Pfam Calcium-binding EGF domain 1028 1059 IPR001881 GO:0005509
Mupr11808g00001 1235 Pfam Protein tyrosine and serine/threonine kinase 432 699 IPR001245 GO:0004672|GO:0006468
Mupr11808g00001 1235 Gene3D Phosphorylase Kinase; domain 1 1125 1235 - -
Mupr11808g00001 1235 SUPERFAMILY Protein kinase-like (PK-like) 405 699 IPR011009 -
Mupr11808g00001 1235 ProSiteProfiles EGF-like domain profile. 1028 1066 IPR000742 -
Mupr11808g00001 1235 SMART serkin_6 429 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11808g00001 1235 Pfam Wall-associated receptor kinase galacturonan-binding 33 92 IPR025287 GO:0030247
Mupr11808g00001 1235 Pfam Wall-associated receptor kinase galacturonan-binding 768 821 IPR025287 GO:0030247
Mupr11808g00001 1235 FunFam Wall-associated receptor kinase 2 505 722 - -
Mupr11808g00001 1235 SUPERFAMILY EGF/Laminin 296 331 - -
Mupr11808g00001 1235 Gene3D Phosphorylase Kinase; domain 1 399 504 - -
Mupr11808g00001 1235 ProSitePatterns Protein kinases ATP-binding region signature. 1170 1193 IPR017441 GO:0005524
Mupr11808g00001 1235 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 21 708 IPR045274 GO:0007166
Mupr11808g00001 1235 ProSitePatterns Calcium-binding EGF-like domain signature. 297 322 IPR018097 GO:0005509
Mupr11808g00001 1235 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 313 324 IPR000152 -
Mupr11808g00001 1235 ProSiteProfiles Protein kinase domain profile. 1164 1235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11808g00001 1235 FunFam Wall-associated receptor kinase 2 397 504 - -
Mupr11808g00001 1235 CDD EGF_CA 1028 1059 - -
Mupr11808g00001 1235 SMART egf_5 981 1027 IPR000742 -
Mupr11808g00001 1235 SMART egf_5 1031 1072 IPR000742 -
Mupr11808g00001 1235 SMART egf_5 300 340 IPR000742 -
Mupr11808g00001 1235 SMART egf_5 248 296 IPR000742 -
Mupr11808g00001 1235 SUPERFAMILY EGF/Laminin 1028 1063 - -
Mupr11808g00001 1235 ProSiteProfiles EGF-like domain profile. 978 1027 IPR000742 -
Mupr11808g00001 1235 Gene3D Laminin 248 337 - -
Mupr11808g00001 1235 Gene3D Laminin 979 1067 - -
Mupr11808g00001 1235 Pfam Protein kinase domain 1168 1230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11808g00001 1235 FunFam Wall-associated receptor kinase 2 1135 1235 - -
Mupr11808g00001 1235 ProSiteProfiles Protein kinase domain profile. 429 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11808g00001 1235 Pfam Wall-associated kinase 171 282 IPR013695 GO:0004674|GO:0016020
Mupr11808g00001 1235 ProSitePatterns Protein kinases ATP-binding region signature. 435 458 IPR017441 GO:0005524
Mupr11808g00001 1235 CDD STKc_IRAK 435 702 - -
Mupr11808g00001 1235 CDD EGF_CA 297 331 - -
Mupr11808g00001 1235 Gene3D Transferase(Phosphotransferase) domain 1 505 722 - -
Mupr11808g00001 1235 FunFam Wall-associated receptor kinase 2 247 299 - -
Mupr11808g00001 1235 ProSiteProfiles EGF-like domain profile. 297 340 IPR000742 -
Mupr11808g00001 1235 ProSitePatterns Serine/Threonine protein kinases active-site signature. 550 562 IPR008271 GO:0004672|GO:0006468
Mupr11808g00001 1235 FunFam Fibrillin 2 1023 1067 - -
Mupr11808g00001 1235 SUPERFAMILY Protein kinase-like (PK-like) 1134 1232 IPR011009 -
Mupr11808g00001 1235 SMART egfca_6 1028 1072 IPR001881 GO:0005509
Mupr11808g00001 1235 SMART egfca_6 297 340 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11808g00001 Mupr-Chr11808 37 13504 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11808g00001 11 724 Receptor kinase-like Gene Family AT1G21230 47.652 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mupr11808g00001 Pkinase 2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11808g00001 - - qlo:115959581 1161.75