Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11802g00002 ATGGTTGAAGATCAAGGTTCACATGATATGGACTTTTTACTGGAAAACCATTCATCGGGTTCTTCCAATACTGATAACTCAGGTGAAAACGAAGAGAACATGAAGTCACCAAATGAGAAAAAAGAAGGTGAACCTCTCATGAATAAGAAGCCAAATCAAGAGATAGCTACTGAAAATAAGGAGAAAACTATTACTAGTGGTGAAGGGACGGATGCCAAGTATCCAGAATCTGATCATGAAATACATTTATCCATTGAGAGACAAAGGAGGAAGAAAATGAAGGACATGTTCGCTACTCTTCATGCTTTGCTTCCGCCACTTCCTACCAAGATATGCAAGTAA 342 0.386 MVEDQGSHDMDFLLENHSSGSSNTDNSGENEENMKSPNEKKEGEPLMNKKPNQEIATENKEKTITSGEGTDAKYPESDHEIHLSIERQRRKKMKDMFATLHALLPPLPTKICK 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11802g00002 113 Pfam Helix-loop-helix DNA-binding domain 82 108 IPR011598 GO:0046983
Mupr11802g00002 113 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 77 113 IPR011598 GO:0046983
Mupr11802g00002 113 Gene3D - 68 113 IPR036638 GO:0046983
Mupr11802g00002 113 MobiDBLite consensus disorder prediction 1 80 - -
Mupr11802g00002 113 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 21 113 IPR044278 GO:0003700|GO:0006355|GO:0009960
Mupr11802g00002 113 MobiDBLite consensus disorder prediction 64 80 - -
Mupr11802g00002 113 MobiDBLite consensus disorder prediction 32 48 - -
Mupr11802g00002 113 MobiDBLite consensus disorder prediction 12 31 - -
Mupr11802g00002 113 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 70 108 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11802g00002 Mupr-Chr11802 4776 5306 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11802g00002 15 110 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 41.837 7.76e-13 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr11802g00002 HLH 2.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11802g00002 - - gmx:102665879 117.472