Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1179g00001 ATGTTTACGTGCATAGCGTGTACGAAGCAAACGACGGATGACAGGGACGAAGAAGGAGGAGCTCGTGAGAGTGGCACGCCGAGTACAAAAGAAGCCGTCAAAAGCCTGACCACGCAGATAAAGGATATGGCACTGAAGTTTTCAGGTGCTTACAAGCAATGCAAACCCTGCACAGGGTCCAGTAGTAGCTACAAGAAAGGACATAGACCATATCCAGACTTTGATACCATCTCAGAAGGGGTTCCATACCCTTACATTGGAGGTGCAAGCTCAAGTTCAACCCCTGCATGGGACTTCACAACCTCTCACTACCCTGGTGGTAGATCTGACCCAAGATTTGCTGGGGCATTTGGTGGTGACCGCACCCCTAGAGGACGTGACTCAGCATCAGTTTGTGATGTAGTCTTAGAGGACGAGGATGAGCCTAAGGAGTGGATGGCACAGGTGGAGCCAGGGGTTCACATTACCTTTGTGTCTCTTCCTAATGGAGGAAATGATCTTAAAAGAATTCGCTTCAGCCGAGAGATGTTTAATAAATGGCAAGCTCAAAGATGGTGGGGTGAGAATTACGACAGAATCATGGAACTTTACAACGTCCAGAGATTTAATCGACAAGCTCTTAACACTCCTCCAAGGTCTGAGGATGAGCAAAGAGATTCTTCTTTTACAAGATTGGCATCTGCACAAGAGAGCCCCATGGTCTCAAACAAGGATTGGACACCGAGGAGTCACTATAAACCCTCTGGGAGCAGAGGATATTACCCCTCTGAACCGTTGGATCACGGTGGTGGTGGCCAGTACCATGCAGGGCCATCTATGGAACCAGCAAGGGATACCACTGCTTCTAGGGATGAGCCTTCTATCAGCAATGCCAGTGAAATGGAGACTGAATGGGTAGAACAAGACGAGCCTGGAGTTTACATTACAATCAGGCAGTTAGCTGATGGGACAAGGGAGCTTCGACGTGTCAGATTCAGCCGGGAGAGATTTGGGGAGGTGAATGCAAAAACTTGGTGGGAAGAGAACAGAGAGAGAATACAAGCTCAATACCTTTGA 1056 0.4839 MFTCIACTKQTTDDRDEEGGARESGTPSTKEAVKSLTTQIKDMALKFSGAYKQCKPCTGSSSSYKKGHRPYPDFDTISEGVPYPYIGGASSSSTPAWDFTTSHYPGGRSDPRFAGAFGGDRTPRGRDSASVCDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQRWWGENYDRIMELYNVQRFNRQALNTPPRSEDEQRDSSFTRLASAQESPMVSNKDWTPRSHYKPSGSRGYYPSEPLDHGGGGQYHAGPSMEPARDTTASRDEPSISNASEMETEWVEQDEPGVYITIRQLADGTRELRRVRFSRERFGEVNAKTWWEENRERIQAQYL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1179g00001 351 MobiDBLite consensus disorder prediction 207 300 - -
Mupr1179g00001 351 MobiDBLite consensus disorder prediction 222 243 - -
Mupr1179g00001 351 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 351 IPR044532 -
Mupr1179g00001 351 MobiDBLite consensus disorder prediction 10 24 - -
Mupr1179g00001 351 Pfam Transcription factor BRX N-terminal domain 23 57 IPR027988 -
Mupr1179g00001 351 ProSiteProfiles BRX domain profile. 143 198 IPR013591 -
Mupr1179g00001 351 Pfam Transcription factor regulating root and shoot growth via Pin3 295 350 IPR013591 -
Mupr1179g00001 351 Pfam Transcription factor regulating root and shoot growth via Pin3 143 197 IPR013591 -
Mupr1179g00001 351 ProSiteProfiles BRX domain profile. 296 351 IPR013591 -
Mupr1179g00001 351 MobiDBLite consensus disorder prediction 9 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1179g00001 Mupr-Chr1179 10814 16419 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1179g00001 1 351 Major Intrinsic Protein MIP AT1G31880 69.296 6.42e-172 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1179g00001 - - ccaj:109789470 694.886