Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11795g00002 ATGTTGTATGAGAGAAAATCCCATGTTTCAGGCTTTGCTTCGGCTTCTCTATTATCCAAGGCTTTTTGGATTTGGATAAACCCCTTGTTGAGTAAAGGATACAAGTCTGCATTGAAGATTGATGAGATTCCGACACTCTCTCCGGAGCATAGAGCTGAGAGAATGTCATCCATTTTTGAATCAAAATGGCCTAATTCAAACGAGACTTGGAAGCATCCGGTTAGAGTCACTTTGCTTCGGTGTTTTTGGAAGGAATTAGCCTTCACTGCGTTCCTTGCAATGATTAGGCTCTGTGTCATGTTTGTGGGGCCGGTTCTCATACAAAGTTTCGTTGATTTCACGTCGGGGAAGAGAAGCTCTGAATACGAAGGATACTACCTCGTGTTGATTCTTTTCATTGCTAAGTTCGTTGAAGTCTTGACTACTCATCATTTCAACTTCCAATCTCAGAAGCTTGGGATGCTTGTTCGGTGCACTCTTATTCCTTCTTTATATAGAAAGGGGCTAAAGCTATCGTTCTCTGCTAGGCAGGATCATGGGATGGGGACCATTGTGAATTACATGGCTGTTGATGCTCAGCAACTCTCTGATATGATGCCTCAGTTACATGCTGTGTGGATGATGCCACTTCAAGTTGCTATTGGCTTGGTTCTGCTTTACAATTGTTTAGGTATTTCAGTAGTTGCGGCGTTTCTTGGTCTTCTTGCTGTTTTTGTGTATTCTGTGATTGGTAACCGTAGGAACAATAACTTCCAGTATAATGTGATGAGGAATCGTGACTCGAGAATGAAAGCTGTGAATGAGATGCTTAATTACATGCGTGTGATCAAGTTTCAGGCCTGGGAGGAGCATTTCAACCAGAGAATTATGGGTTTCCGCAACACTGAGTATGGGTGGCTCTCCAAGTTGATGTTTTCAATTTGTGGTATTATCGTTGTGATGTGGAGCACACCGATGTTGGTGTCAACTCTCACATTTGGTACGGCTATTTTGCTGGGAGTTCAACTTGATGCAGCCACGGTCTTCACCACTACAACTATCTTCAAAATATTGCAGGAGCCTATTAGGACATTCCCACAGTCAATGATATCTCTTTCACAAGCAATGATATCACTGGAGAGGTTAGACAGGTTCATGTTGAGCAGGGAATTGTCGAATGATTCAGTCGTGAGAGAGGAAGGCCGTGGTGGACAAACAGCAGTGGAAATCATAAATGGGACTTTTAGTTGGGATGATGATAACATGCTGCAGGACTTGAAAAATATTAATTTGCAGATAAAAAAGGGGGAGCTTACAGCAATTGTTGGGACTGTAGGGTCAGGAAAGTCGTCTCTTCTCGCATCAATTCTTGGAGAGATGCACAAGGTTTCTGGAAAGGTAACTATTTTTTATTTATGGATGTTTATAGTTGAGTCTGATTATGATAATTATATATTTCCGTCACAGGTTCGGGTTTGTGGGAGTGTTGCCTATGTTGCACAAACATCTTGGATTCAGAATGGGACCATTGAAGAAAACATTCTCTTTGGTTTACCAATGGATAGACAAAGGTACAATGAAGCTATCCAGGTCTGTAATTTGGAGAAAGATTTGGAAATGATGGATTATGGGGATCAGACAGAAATTGGAGAGCGTGGTATCAACCTGAGTGGAGGCCAGAAACAGCGTATACAACTTGCCAGGGCTGTGTATCAAGACTGTGATATATATCTTCTTGATGATGTCTTCAGTGCTGTTGATGCTCATACTGGTTCTGAAATATTTAAGGTGGTTATTCTCAAAATGAATGATTCATACTCTGCATTATGTTCAAATATAATTTTACTCATTCATATGTTGTTGAATGTTATTAGGCATGTGCTAGAATGCGTGAGGGGAGCCCTAAAAGGAAAAACCACTATTCTTGTAACACACCAAGTAGATTTCCTACATAATGTAGATCTTATATTAGTGATGAGGGACGGTAAGATAGTCCAATCAGGGAAGTACGATGATATATTAGATTCTGGAATGGATTTTAAAGCTCTGGTAGTTGCACATGAGACCTCCATGGAACTTGTAGAGCAGGGTGTGGTCATGCCTGGTGAAAATTTGAACAAACCAATGAAATCTTCAGGGGCAGCATCTATTTATAAGGGAACCAATTCTCTTGACCAGGCCGTGTCTAGCAAGAAAAGTTCTAAACTCATCACAGAAGAGGAGAGAGCATCTGGCAAAGTGAGCTTACATATCTATAAACTCTACTGCACTGAGGCTTTTGGGTGGTGGGGTATTACAGTAGTATTGGTTCTTTCTTTGTTATGGCAAGCATCTTTGATGGCAAGTGATTATTGGCTGGCATATGAAACCTCAGAGGAACGTGCTAAAATGTTTAACCCTTCTCTGTTCATGTCCATCTATGTAATTATTACTGTTGTTTCGGTTATTTTGGTAGTGGTAAGATGCTACTTCTTTACACTCTTGGGGCTAAGGACAGCACAAATTCTCTTCACACAAATTCTTCGTAGCATCTTGCATGCGCCCATGTCTTTCTTTGACACTACGCCATCTGGGAGAATTCTAAGTAGGGCATCCACTGATCAGACCAATGTTGATGTCCTTCTCCCCTTGTTCACGGGAGTTGTTATTGTCATGTACATTACAGTACTCAGCATCTTCATCATCACCTGTCAAAATTCTTGGCCAACAGTGCTTTTGATAATTCCTCTTATTTGGTTGAATATATGGTACCGGGGTTACTTTCTTGCATCATCTCGTGAGTTAACTCGCTTGGATTCAATTACCAAAGCGCCAGTTATTCATTACTTCTCTGAAAGCATTGCAGGGGTCATGACTATCCGTTCATTCAGAAAGCAAAAGATATTTTGTGAAGAAAATCTCAAACGGGTGAATGGTAATTTGCGAATGGATTTCCACAACTTTAGTTCTAATGAGTGGTTGGGACTTCGCATAGAATTGTTTGGAAGCCTTGTCTGTTGCATTTCTGCCATGTTCATGATCATCTTACCCAGCAGTATCATAAAGCCAGAAAATGTTGGTTTATCTCTCTCTTATGGGTTGTCCTTAAATGCTGTCTTGTTCTGGGCTGTATACATGAGCTGTTTCATCGAAAACAAAATGGTGTCCGTTGAGAGGATAAAGCAGTTTACAAATATTCCATCGGAACCAGCATGGAATATCAAGGATCACCTGCCTCCTTCAAATTGGCCA 3210 0.4097 MLYERKSHVSGFASASLLSKAFWIWINPLLSKGYKSALKIDEIPTLSPEHRAERMSSIFESKWPNSNETWKHPVRVTLLRCFWKELAFTAFLAMIRLCVMFVGPVLIQSFVDFTSGKRSSEYEGYYLVLILFIAKFVEVLTTHHFNFQSQKLGMLVRCTLIPSLYRKGLKLSFSARQDHGMGTIVNYMAVDAQQLSDMMPQLHAVWMMPLQVAIGLVLLYNCLGISVVAAFLGLLAVFVYSVIGNRRNNNFQYNVMRNRDSRMKAVNEMLNYMRVIKFQAWEEHFNQRIMGFRNTEYGWLSKLMFSICGIIVVMWSTPMLVSTLTFGTAILLGVQLDAATVFTTTTIFKILQEPIRTFPQSMISLSQAMISLERLDRFMLSRELSNDSVVREEGRGGQTAVEIINGTFSWDDDNMLQDLKNINLQIKKGELTAIVGTVGSGKSSLLASILGEMHKVSGKVTIFYLWMFIVESDYDNYIFPSQVRVCGSVAYVAQTSWIQNGTIEENILFGLPMDRQRYNEAIQVCNLEKDLEMMDYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSEIFKVVILKMNDSYSALCSNIILLIHMLLNVIRHVLECVRGALKGKTTILVTHQVDFLHNVDLILVMRDGKIVQSGKYDDILDSGMDFKALVVAHETSMELVEQGVVMPGENLNKPMKSSGAASIYKGTNSLDQAVSSKKSSKLITEEERASGKVSLHIYKLYCTEAFGWWGITVVLVLSLLWQASLMASDYWLAYETSEERAKMFNPSLFMSIYVIITVVSVILVVVRCYFFTLLGLRTAQILFTQILRSILHAPMSFFDTTPSGRILSRASTDQTNVDVLLPLFTGVVIVMYITVLSIFIITCQNSWPTVLLIIPLIWLNIWYRGYFLASSRELTRLDSITKAPVIHYFSESIAGVMTIRSFRKQKIFCEENLKRVNGNLRMDFHNFSSNEWLGLRIELFGSLVCCISAMFMIILPSSIIKPENVGLSLSYGLSLNAVLFWAVYMSCFIENKMVSVERIKQFTNIPSEPAWNIKDHLPPSNWP 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11795g00002 1070 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 13 1070 - -
Mupr11795g00002 1070 Pfam ABC transporter 419 575 IPR003439 GO:0005524
Mupr11795g00002 1070 CDD ABC_6TM_ABCC_D1 88 375 IPR044746 GO:0140359
Mupr11795g00002 1070 SMART AAA_5 428 664 IPR003593 GO:0016887
Mupr11795g00002 1070 Pfam ABC transporter transmembrane region 88 354 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr11795g00002 1070 Pfam ABC transporter transmembrane region 762 1011 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr11795g00002 1070 SUPERFAMILY ABC transporter transmembrane region 78 379 IPR036640 GO:0005524|GO:0016020
Mupr11795g00002 1070 ProSitePatterns ABC transporters family signature. 549 563 IPR017871 GO:0005524|GO:0016887
Mupr11795g00002 1070 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 616 669 IPR027417 -
Mupr11795g00002 1070 CDD ABCC_MRP_domain1 401 656 - -
Mupr11795g00002 1070 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 760 1038 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr11795g00002 1070 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 87 367 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr11795g00002 1070 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 401 679 IPR003439 GO:0005524
Mupr11795g00002 1070 CDD ABC_6TM_ABCC_D2 758 1050 IPR044726 GO:0140359
Mupr11795g00002 1070 Gene3D - 399 685 IPR027417 -
Mupr11795g00002 1070 Gene3D ABC transporter type 1, transmembrane domain 61 383 IPR036640 GO:0005524|GO:0016020
Mupr11795g00002 1070 Gene3D ABC transporter type 1, transmembrane domain 719 1056 IPR036640 GO:0005524|GO:0016020
Mupr11795g00002 1070 FunFam ABC transporter C family member 5 721 1056 - -
Mupr11795g00002 1070 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 400 598 IPR027417 -
Mupr11795g00002 1070 SUPERFAMILY ABC transporter transmembrane region 755 1055 IPR036640 GO:0005524|GO:0016020
Mupr11795g00002 1070 FunFam ABC transporter C family member 10 71 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11795g00002 Mupr-Chr11795 9998 14213 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11795g00002 401 864 Calmodulin-binding Proteins AT2G36910 24.603 2.94e-25 111