Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11794g00002 ATGTTGTATGAGAGAAAATCCCATGTTTCAGGCTTTGCTTCGGCTTCTCTATTATCCAAGGCCTTTTTGGTTTGGATAAACCCCATGTTGCGTAAAGGGTACAAGTCCGCGCTGAAGATGGATGAGATTCCAACGCTTTCTCCGGAGCATAGAGCTGAGAGAATATCATCTATTTTTGAATCAAAATGGCCTAATTCAATCGAAAGTTGGAAGCATCCGGTTAGAATCACTTTGCTTCGGTGCTTTTGGAAAGAGTTAGCCTTCGCTGCTTCCCTTGCAACGATTAGGCTCTGTGTCATGTTTGTGGGGCCGGTTCTCATACAAAGTTTTGTTGATTTCACATCGGGGAAGAGAAGCTCTGAATATGAAGGATACTACCTCGTGTTGATTCTTCTCGTTTCCAAGTTCGTTGAAGTCTTGAGTACACATCATTGCAACTTCCAAGCTCAAAAACTTGGGACGCTTATAAGGAGCGCTATTATTCCTTCTTTGTATAAAAAGGGGCTAAAGCTATCGTCCTCTGCTCGACAGGATCATGGGATAGGGACCATTGTGAATTACATGGCTGTTGATGCTCAGCAACTCTCTGACATGATGCTTCAGTTAAATGCTGTGTGGATGATGCCATTTCAAGTTACTATTGGCTTGGTTCTGCTTTACAATTGTTTAGGTGCCACAGTAGTCACTGCGATTCTTGGTCTTTTTGCTGTTTTTGTGTTTGCTATTATTGGTAACAGTAGGAACAACCACTTCCAATTCAACGTGATGAGGAACCGTGACTCGAGAATGAAAGCTGTGAATGAGATGCTTAATAACATGCGTGTGATCAAGTTTCAGGCCTGGGAGGAGCATTTCAACCAGAGAATTATGGGTTTCCGCAACACTGAGTATGGGTGGCTCTCCAAGTTGATGTTCTCAATGTGTGGCAATCTTGTTGTGATGTGGAGCACGCCGTTGTTGGTGTCAATGCTGACGTTTGGTACGGCTATTTTGCTGGGAGTTCAATTTAATGCAGCCACGGTCTTCACCGCAACGACTATCTTCAAGAACTTGCAGGAGCCTATTAGGACGTTCCCGCAGTCAATGATATCTCTTTCACAAGCAATGATATCACTGGATAGGTTAGATAGATTCATGTTAAGCAGGGAATTGTCGAATGATTCGGTTGAGAGAGAGGAAGGCTGTGGTGGACAAACAGCAGTGGAAATCATAGATGGGACTTTTAGTTGGGATGATGACAACATGCTGCACGACTTGAAAAATATTAATTTGGATATCAAAAAGGGGGAGCTTACAGCAATTGTTGGGACTGTAGGGTCAGGAAAGTCGTCCCTTCTTGCGTCAATTCTTGGAGAGATGTGCAAGATTTCGGGAAAGGTTCGGATTTGTGGGAGTGTTGCCTACGTTGCACAAACATCTTGGATTCAGAATGGGACTATTGAAGAAAATATTCTCTTTGGTTTGCCGATGGACAGACAGAGGTACAATGAAGTTATCAGGGTATGTTGTTTGGAGAAAGATTTGGAAATGATGGATTATGGGGATCAGACAGAAATTGGAGAGCGTGGTATCAACCTGAGTGGAGGCCAGAAGCAGCGCATACAACTTGCCAGGGCTGTGTATCAAGACTGTGATATATATCTTCTTGATGATGTCTTCAGTGCTGTTGATGCTCACACTGGCTCTGAAATATTTAAGAGTTTAAGCGCAAAACCTCCGATTCCTAACTTTTTTCATATGCAGGAATGCGTGAGGGGAGCCCTACAAGGCAAGACCATTATTCTTGTGACACACCAAGTAGATTTCCTACATAATGTGAATCTTATATTAGTGATGAGGGACGGTATGATAGTCCAATCAGGGAAGTACAATGATCTATTAGATTCTGGAATGGATTTTAAAGCTCTGGTAGTTGCACATGAGGCCTCCATGGAACTAGTAGAGCAGGATGTAATCATAGCTGGTGAAAATTTGAACAAACCAACGAAATCTCCAGAGGCAGCTACTGTTTACAAGGGAACCAATGGTGAAAGCAATTCTCTTGACCGGCCCGTGTCTAGCAAGAAAAGTTCTAAACTCATCAAAGAAGAGGAGAGAGCAACTGGCAAAGTGAGCTTACATATCTATAAACTCTATTGCACTGAGGCTTATGGGTGGTGGGGCATTACCGTAGTGTTGGTTCTTTCTTTACTATGGCAAGCAACTATGATGGCAAGTGATTATTGGCTGGCGTATGAAACCTCAGAGGCCCGTGCTAAAATGTTCAACCCTTCTCTGTTCATGTCCATCTATGCAATTATTACCGCTGTCTCCGTTATTTTGGTAGTGGCAAGGTCCTTCTTCTTTACAATCTTGGGGCTGAAGACAGCACAAATTTTTTTCACACAAATTCTTTGTAGCATCTTGCATGCGCCCATGTCTTTCTTTGACACAACACCATCTGGGAGAATTCTAAGTAGGGCATCCGCTGATCAGAGCAATGTTGATGTCGGTCTCCCCATGTTCATGGGGACTGTTATTATCATGTACGTTACAGTGCTCGGCATCTTCGTCGTCACCTGTCAAAATTCTTGGCCAACAGTGTTTTTGATAATCCCTCTTTTTTGGGTGATTATATGGTACCGGGGTTACTATCTTGCTTCATCTCGTGAATTAACTCGCCTGGAATCTATTACCAAAGCACCAGTCATTCATCACTTCTCTGAAAGCATTGCAGGGGTCATGACAATCCGCGCATTCAGAAAGCAAAAGAAATTTTGTGAAGAAAATATCAACCGGGTGAATGCTAATTTGCGAATGGATTTCCACAACTATAGTTCTAATGTGTGGTTGGGACTACGCCTAGAGCTGCTTGGAAGCTTTGTCTTTTGCACTTCTGCCATGTTCATGATCATCTTACCCAGCAGTATCATAAAGCCAGAGAATGTTGGTTTATCTCTCTCTTATGGGTTGTCCTTAAATGCTGTCTTGTTCTGGGCTGCATTGATGAGCTGTTTCGTCGAAAACAAGATGGTGTCTGTCGAGAGGATAAAGCAGTTTTCAAATATTGCATCGGAACCCGCATGGAATATTAAGGATCATCTACCTCCTTCAAATTGGCCA 3102 0.4297 MLYERKSHVSGFASASLLSKAFLVWINPMLRKGYKSALKMDEIPTLSPEHRAERISSIFESKWPNSIESWKHPVRITLLRCFWKELAFAASLATIRLCVMFVGPVLIQSFVDFTSGKRSSEYEGYYLVLILLVSKFVEVLSTHHCNFQAQKLGTLIRSAIIPSLYKKGLKLSSSARQDHGIGTIVNYMAVDAQQLSDMMLQLNAVWMMPFQVTIGLVLLYNCLGATVVTAILGLFAVFVFAIIGNSRNNHFQFNVMRNRDSRMKAVNEMLNNMRVIKFQAWEEHFNQRIMGFRNTEYGWLSKLMFSMCGNLVVMWSTPLLVSMLTFGTAILLGVQFNAATVFTATTIFKNLQEPIRTFPQSMISLSQAMISLDRLDRFMLSRELSNDSVEREEGCGGQTAVEIIDGTFSWDDDNMLHDLKNINLDIKKGELTAIVGTVGSGKSSLLASILGEMCKISGKVRICGSVAYVAQTSWIQNGTIEENILFGLPMDRQRYNEVIRVCCLEKDLEMMDYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSEIFKSLSAKPPIPNFFHMQECVRGALQGKTIILVTHQVDFLHNVNLILVMRDGMIVQSGKYNDLLDSGMDFKALVVAHEASMELVEQDVIIAGENLNKPTKSPEAATVYKGTNGESNSLDRPVSSKKSSKLIKEEERATGKVSLHIYKLYCTEAYGWWGITVVLVLSLLWQATMMASDYWLAYETSEARAKMFNPSLFMSIYAIITAVSVILVVARSFFFTILGLKTAQIFFTQILCSILHAPMSFFDTTPSGRILSRASADQSNVDVGLPMFMGTVIIMYVTVLGIFVVTCQNSWPTVFLIIPLFWVIIWYRGYYLASSRELTRLESITKAPVIHHFSESIAGVMTIRAFRKQKKFCEENINRVNANLRMDFHNYSSNVWLGLRLELLGSFVFCTSAMFMIILPSSIIKPENVGLSLSYGLSLNAVLFWAALMSCFVENKMVSVERIKQFSNIASEPAWNIKDHLPPSNWP 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11794g00002 1034 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 87 367 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr11794g00002 1034 Pfam ABC transporter transmembrane region 723 967 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr11794g00002 1034 Pfam ABC transporter transmembrane region 90 352 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr11794g00002 1034 CDD ABC_6TM_ABCC_D1 88 375 IPR044746 GO:0140359
Mupr11794g00002 1034 Pfam ABC transporter 419 552 IPR003439 GO:0005524
Mupr11794g00002 1034 SUPERFAMILY ABC transporter transmembrane region 719 1015 IPR036640 GO:0005524|GO:0016020
Mupr11794g00002 1034 Coils Coil 910 930 - -
Mupr11794g00002 1034 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 13 1034 - -
Mupr11794g00002 1034 MobiDBLite consensus disorder prediction 662 687 - -
Mupr11794g00002 1034 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 401 639 IPR003439 GO:0005524
Mupr11794g00002 1034 SMART AAA_5 428 624 IPR003593 GO:0016887
Mupr11794g00002 1034 Gene3D - 377 655 IPR027417 -
Mupr11794g00002 1034 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 724 1002 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr11794g00002 1034 FunFam ABC transporter C family member 10 71 383 - -
Mupr11794g00002 1034 SUPERFAMILY ABC transporter transmembrane region 77 379 IPR036640 GO:0005524|GO:0016020
Mupr11794g00002 1034 Gene3D ABC transporter type 1, transmembrane domain 76 376 IPR036640 GO:0005524|GO:0016020
Mupr11794g00002 1034 MobiDBLite consensus disorder prediction 661 689 - -
Mupr11794g00002 1034 Gene3D ABC transporter type 1, transmembrane domain 684 1020 IPR036640 GO:0005524|GO:0016020
Mupr11794g00002 1034 ProSitePatterns ABC transporters family signature. 526 540 IPR017871 GO:0005524|GO:0016887
Mupr11794g00002 1034 CDD ABCC_MRP_domain1 401 615 - -
Mupr11794g00002 1034 CDD ABC_6TM_ABCC_D2 722 1014 IPR044726 GO:0140359
Mupr11794g00002 1034 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 400 636 IPR027417 -
Mupr11794g00002 1034 FunFam ABC transporter C family member 4 384 657 - -
Mupr11794g00002 1034 FunFam ABC transporter C family member 5 685 1020 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11794g00002 Mupr-Chr11794 4903 8879 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11794g00002 401 854 Calmodulin-binding Proteins AT2G36910 24.506 4.27e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11794g00002 - K05666 gmx:100808752 1741.47