Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1178g00003 ATGAAAGAATCAAAGCTTTCTTTTATAAGTAGTAAGGTGAAAGGATCAAATTACTCAATGGAGAAAATAGAGTTCACCCTTTTATTTCTTGTTACTTGTTGCTATTTGATTTTCTTGTTTCCTACAGCTCTGGAAGCAGATGATGCAATAACTCCCCCACAAACCATCAATGGCAACCAGACACTAGTCTCACCTTCCCAAAATTTTGAACTGGGTTTCTTCAGTCCTGGCAATTCCACATACACCTATCTTGGAATATGGTACAAGCATATTCCAAAACAGACAGTTATTTGGGTTGCAAATAGAGACAAACCACTTGTTCACTCTGGTGGCTCCTTAACATTCAGCAATGATGGCAAGCTCATCCTTCTCAGCCACACAGGAAGTGTTGTATGGTCCTCAAACTCATCTGGACCTGCAAGAAACCCAGTTGCACAGCTTTTAGACTCTGGAAACTTTGTGTTGAAGGACTATGGAGATGAGGGATATTTGTGGGAGAGTTTTGATTATCCATCTGACACATTGATACCAGGAATGAAGCTTGGTTGGAACCTCAAAACTGGCTTGAACCGACATTTGACTTCTTGGAAAAGCACTTCTGATCCTTCTTCGGGAGAATACACCTACAGTGTGGATCCACGTGGCCTTCCTCAGCTTTTTCTTCACAAGGGAAACGAAAAGGTCTTCAGAAGTGGACCATGGTATGGACAGCAATTCAAAGGTGATCCGGTTCTCAGTGCAAATCCAGTTTTCAAACCCGTATTTGTTTTTGATTCTGATGAAGTGTCTTACTCTTATGAGACCAAAGACACCATCATTTCAAGATTTGTGCTGAGTCAGACTGGTTTGATTCAGCATTTTTCATGGAATGATCATCATTCAAGTTGGTTCTCTGAATTCTCAGTTCAAGGGGACTCCTGTGATGGTTATGGCCTTTGTGGTGCTTATGGTTCTTGTAACATCAAAAGCTCCCCGATTTGCAAATGTTTGAAGGGTTTTGAGCCTAAGCTTCCTCTACAATGGGAAGGGTCTGAGTGGTCAGGTGGATGTGTTAGGGAAAACTCACAGGTTTGCAGCAACGGAGATTCATTTGAGCAGTTTACAGGAATGAAACTACCAGATGCTGCTGAGTTTCATACAAACTACAGCATCAGCATTGATCACTGTGAGGCACAATGCTCCAAGAATTGCTCTTGTGTTGCTTATGCCAAACTAGATATAAATGCAAGCGGCAAAGGCTGTATTGCTTGGTTTGGGGATTTATTTGATATAAGAGAGGTTTCTGTTCATGGACAAGATTTCTACGTCAGAGTTCCAGCTTCAGAAATAGGTTCAAATGTTGATGGAAACAAAAGGAAGAAACTCATACTGTTTCCTGTGACTGCATCTGTGACTTCAACAATTGTTGTATTAGCATTATGGTTGATAATTAAGAAATGCAAAAGAAACGGAGCCAAAGAGACAGGTAGTCAGTTTAGTGTTGGCAGTGCTAGGAGTGAAAGGAATGAATTTGAACTCCCATTGTTTGAGATTGCCATAATTGAAGCCGCCACAGGGAATTTCTCTATTGACAATAAAATTGGAGAAGGTGGATTTGGTTCCGTATACAAAGGTCAACTTCCATCAGGAGAGGAAATAGCAGTGAAGAGGCTGTCAGAGACTTCTGGACAAGGCCTGCAGGAGTTCAAGAATGAGGTTATTTTGATCTCCCAACTTCATCATCGAAATCTTGTCAAGCTTCTGGGTTGTTGCATTCATGGAGAAGATAGAATATTGGTCTACGAATACATGCCAAACAGAAGCTTAGACACCTTATTATTTGGTTGGTCTCTCAACTATTCCACAATCACATCTACGCATAGAAACACATACTTTGAGCAAACATGTTCGGTTAATCAAAATAGACTCTATAACACAAATGAAACCAAGCGTTTGCTCACTTGGCAAGAGAGGCTTGACATAATTATTGGCATTGCTCGGGGACTTCTCTACCTTCACAGAGACTCGAGACTAAGAATAATCCATAGAGACCTGAAAGCAAGCAACGTTCTTTTAGATGGTGAAATGAACCCAAAAATTTCTGACTTTGGAATGGCAAGAATGTTCGGTGGAGATCAAACTGAAGCAAAGACCAAGAGAGTAGTGGGAACCTATGGATATATGCCCCCAGAGTATGCAATAGATGGACACTTCTCTTTCAAATCGGATGTTTATAGCTTTGGGGTTTTACTCTTGGAGCTGTTGAGCGGCAAGAAAAACAAAGGATTTTTTCACCCAGATCACAAACTGAATCTCCTAGGCCATGTGAGTATACGGGCATGGAAGCTATGGAATGAAGGTAGGGCCTTGGAGATGATGGATCCATTGCTTGAGAGTGAGTTTCCCACATCTGAAGTTCTAAGGTGCATTCAAGTGGGTCTGTCATGCGTCCAACAGCACCCAGAAGATAGGCCAACAATGCCATTGGTGCTTTTGATGTTGAACAGTGAGAGTGTGTTGGTCCCCCAACCTGGAAGACCAGGATTTTATTCCGAGAGATGTTTCTCTGACACAAATTTATCATCACGTGCTGGACTCAACTCTTGTTTCAATGACACAACTGTTACTTTACTAGACACTCGTATCATCATGCTTAGATTTGTTTTGGATGTAGGCTCTGTGATCAGAATGCTACACCAGTCACCATTCTCGAGACGAAGTACTTGA 2706 0.4157 MKESKLSFISSKVKGSNYSMEKIEFTLLFLVTCCYLIFLFPTALEADDAITPPQTINGNQTLVSPSQNFELGFFSPGNSTYTYLGIWYKHIPKQTVIWVANRDKPLVHSGGSLTFSNDGKLILLSHTGSVVWSSNSSGPARNPVAQLLDSGNFVLKDYGDEGYLWESFDYPSDTLIPGMKLGWNLKTGLNRHLTSWKSTSDPSSGEYTYSVDPRGLPQLFLHKGNEKVFRSGPWYGQQFKGDPVLSANPVFKPVFVFDSDEVSYSYETKDTIISRFVLSQTGLIQHFSWNDHHSSWFSEFSVQGDSCDGYGLCGAYGSCNIKSSPICKCLKGFEPKLPLQWEGSEWSGGCVRENSQVCSNGDSFEQFTGMKLPDAAEFHTNYSISIDHCEAQCSKNCSCVAYAKLDINASGKGCIAWFGDLFDIREVSVHGQDFYVRVPASEIGSNVDGNKRKKLILFPVTASVTSTIVVLALWLIIKKCKRNGAKETGSQFSVGSARSERNEFELPLFEIAIIEAATGNFSIDNKIGEGGFGSVYKGQLPSGEEIAVKRLSETSGQGLQEFKNEVILISQLHHRNLVKLLGCCIHGEDRILVYEYMPNRSLDTLLFGWSLNYSTITSTHRNTYFEQTCSVNQNRLYNTNETKRLLTWQERLDIIIGIARGLLYLHRDSRLRIIHRDLKASNVLLDGEMNPKISDFGMARMFGGDQTEAKTKRVVGTYGYMPPEYAIDGHFSFKSDVYSFGVLLLELLSGKKNKGFFHPDHKLNLLGHVSIRAWKLWNEGRALEMMDPLLESEFPTSEVLRCIQVGLSCVQQHPEDRPTMPLVLLMLNSESVLVPQPGRPGFYSERCFSDTNLSSRAGLNSCFNDTTVTLLDTRIIMLRFVLDVGSVIRMLHQSPFSRRST 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1178g00003 901 Gene3D Phosphorylase Kinase; domain 1 484 596 - -
Mupr1178g00003 901 CDD B_lectin 54 171 IPR001480 -
Mupr1178g00003 901 CDD PAN_AP_plant 358 439 - -
Mupr1178g00003 901 ProSiteProfiles Bulb-type lectin domain profile. 47 168 IPR001480 -
Mupr1178g00003 901 CDD STKc_IRAK 527 828 - -
Mupr1178g00003 901 SUPERFAMILY alpha-D-mannose-specific plant lectins 96 202 IPR036426 -
Mupr1178g00003 901 ProSitePatterns Serine/Threonine protein kinases active-site signature. 673 685 IPR008271 GO:0004672|GO:0006468
Mupr1178g00003 901 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 630 835 - -
Mupr1178g00003 901 SMART serkin_6 521 832 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1178g00003 901 Pfam S-locus glycoprotein domain 229 336 IPR000858 GO:0048544
Mupr1178g00003 901 SMART ntp_6 359 438 IPR003609 -
Mupr1178g00003 901 ProSiteProfiles Protein kinase domain profile. 521 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1178g00003 901 ProSiteProfiles PAN/Apple domain profile. 358 439 IPR003609 -
Mupr1178g00003 901 Gene3D - 43 168 IPR036426 -
Mupr1178g00003 901 SMART blect_4 53 171 IPR001480 -
Mupr1178g00003 901 PIRSF SRK 19 874 IPR024171 GO:0004674
Mupr1178g00003 901 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Mupr1178g00003 901 SUPERFAMILY Protein kinase-like (PK-like) 505 838 IPR011009 -
Mupr1178g00003 901 FunFam Os04g0303100 protein 86 227 - -
Mupr1178g00003 901 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 30 818 - -
Mupr1178g00003 901 Gene3D Hepatocyte Growth Factor 355 435 - -
Mupr1178g00003 901 Gene3D Transferase(Phosphotransferase) domain 1 633 833 - -
Mupr1178g00003 901 Pfam Protein tyrosine and serine/threonine kinase 522 821 IPR001245 GO:0004672|GO:0006468
Mupr1178g00003 901 Pfam D-mannose binding lectin 95 197 IPR001480 -
Mupr1178g00003 901 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 486 596 - -
Mupr1178g00003 901 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 42 168 - -
Mupr1178g00003 901 Pfam PAN-like domain 358 424 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1178g00003 Mupr-Chr1178 39261 43002 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1178g00003 436 842 Receptor kinase-like Gene Family AT4G05200 48.411 5.96e-121 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr1178g00003 PK_Tyr_Ser-Thr 6.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1178g00003 - - gmx:100804024 1481.46