Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11753g00001 ATGGCTCATTCAGGTGAACCCTCATCATCTTTGAGCTTTACATCATCTTCTCATTTATCAAATGGCTCGGTTAGTCACAACATATACTCTTCTTACGGCTCCGACCTTGGACCTAACCTTGAGGTTATCAGTTTGAGTAAGCTTAGCTCCAATTTGGAGCAGCTTTTGATTGAGCCTGATTGTGATTATAGTGATGCTCACATCATTGTGGAAGGTGTTCCGGTTAGTGTTCATCGATGTATTCTGGCCTCCAGGAGCAAGTTTTTCCATGACTTATTCAAGAGAGAGAATGAGTCATCAGAAAAAGAAGGAAAATTGAAGTATTGCATGAGTGATTTGTTGCCTTATGGCAAGGTTGGACACGAAGCCTTCCTCATATTCATGGGCTATGTATATACTGGTAAACTCAAGCCCTCTCCAATGGAGGTGTCTACTTGTGTTGATAATGTGTGTGCCCATGATGCTTGTAGACCTGCAATTAACTTCGCTGTGGAGTTGATGTATGCCTCTTCCATTTTCCAAATACCAGAGTTGGTGTCACTTTTCCAGCGACGTCTACTTAACTTTGTAGGAAAGGCTCTTGTGGAAGATGTCATCCCAATCCTCACTGTTGCTTTCCATTGTCAATTGGGTCAACTTGTCACACAATGTATTGACAGGGTGGCCAGATCAGACCTTGACCAGATTTCAATTGAAAAAGAGCTTCCCCATGAACTCTCCGAAAAAGTTAAATTGCTCCGCCGCAACCCTCAGCCAGATGTTGAAAACGATGATTCTGTAGTGGATGCTTTGGCTTTAAAACGAATCACTAGAATACACAAGGCACTGGACTCAGATGATGTTGAGCTTGTTAAACTTCTTTTAAATGAGTCAGATATTACTTTAGATGAAGCCTATGCTCTCCATTATGCTGCAGCATACTGTGACCCCAAGGTTGTTTCTGAGGTACTCAGTTTGGGTCTGGCTAATGTCAATCTTCGGAATTCTCGTGGGTACACGGTGCTTCACATTGCTGCCATGCGTAAAGAGCCTTCCATTATAGTTTCCCTACTTACAAAAGGAGCTTGTGCATTAGATTTGACTTTTGATGGTCAGAGTGCTGTTAGTATTTGTAGGAGGTTGACAAGGCCAAAGGATTATCATGCAAAAACAGAAAAGGGGAAAGAAACAAACAAAGATCGGATATGCATTGATGTTCTTGAAAGAGAAATGCGGAGGAATCCAATGGCCGGGGATGCCTGTATGTCTTCCCATACCATAGCTGACGATCTCCACATGAAGCTCCTATACCTTGAGAACAGAGTGGCATTTGCAAGACTTTTCTTCCCTTCGGAAGCCAAATTGGCCATGGACATTGCACATGCTGAGACAACATCTGAGTTTGCTGGTCTTTCTGCATCAAAAGGTTCAAATGGCAACTTAAGGGAGGTTGATCTCAATGAGACTCCCATAGTGCAAAATAAAAGACTTCTTTCTAGGATGGAAGCCCTTATGAAAACAGTGGAAATGGGGCGGCGGTACTTCCCACATTGCTCGGAAGTGCTGGATAAGTTCATGGAGGATGACCTGCCAGATCTGTTTTACCTGGAGAAGGGAACCCACGATGAGCAGAGAATCAAAAGGAAGCGTTTCATGGAGCTCAAAGATGACGTCCACAAGGCTTTCAACAAGGACAAGGCCGAGTTTAGCCGCTCTGGGATTTCATCTTCATCATCCTCATCATCCCTCAGAGATTCTGTTGTACATTGCAAGGCTAGGAAAGTGTAA 1767 0.4346 MAHSGEPSSSLSFTSSSHLSNGSVSHNIYSSYGSDLGPNLEVISLSKLSSNLEQLLIEPDCDYSDAHIIVEGVPVSVHRCILASRSKFFHDLFKRENESSEKEGKLKYCMSDLLPYGKVGHEAFLIFMGYVYTGKLKPSPMEVSTCVDNVCAHDACRPAINFAVELMYASSIFQIPELVSLFQRRLLNFVGKALVEDVIPILTVAFHCQLGQLVTQCIDRVARSDLDQISIEKELPHELSEKVKLLRRNPQPDVENDDSVVDALALKRITRIHKALDSDDVELVKLLLNESDITLDEAYALHYAAAYCDPKVVSEVLSLGLANVNLRNSRGYTVLHIAAMRKEPSIIVSLLTKGACALDLTFDGQSAVSICRRLTRPKDYHAKTEKGKETNKDRICIDVLEREMRRNPMAGDACMSSHTIADDLHMKLLYLENRVAFARLFFPSEAKLAMDIAHAETTSEFAGLSASKGSNGNLREVDLNETPIVQNKRLLSRMEALMKTVEMGRRYFPHCSEVLDKFMEDDLPDLFYLEKGTHDEQRIKRKRFMELKDDVHKAFNKDKAEFSRSGISSSSSSSSLRDSVVHCKARKV 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11753g00001 588 Gene3D Potassium Channel Kv1.1; Chain A 39 222 IPR011333 -
Mupr11753g00001 588 ProSiteProfiles BTB domain profile. 64 140 IPR000210 GO:0005515
Mupr11753g00001 588 PANTHER REGULATORY PROTEIN NPR3 10 579 IPR044292 GO:0009862|GO:2000022|GO:2000031
Mupr11753g00001 588 FunFam regulatory protein NPR3-like 264 404 - -
Mupr11753g00001 588 ProSiteProfiles Ankyrin repeat profile. 330 355 IPR002110 GO:0005515
Mupr11753g00001 588 SMART ANK_2a 296 326 IPR002110 GO:0005515
Mupr11753g00001 588 SMART ANK_2a 267 295 IPR002110 GO:0005515
Mupr11753g00001 588 SMART ANK_2a 330 360 IPR002110 GO:0005515
Mupr11753g00001 588 SUPERFAMILY POZ domain 49 188 IPR011333 -
Mupr11753g00001 588 FunFam Regulatory protein NPR3 38 222 - -
Mupr11753g00001 588 SUPERFAMILY Ankyrin repeat 262 373 IPR036770 -
Mupr11753g00001 588 CDD BTB_POZ_NPR_plant 47 190 - -
Mupr11753g00001 588 MobiDBLite consensus disorder prediction 562 588 - -
Mupr11753g00001 588 SMART BTB_4 64 190 IPR000210 GO:0005515
Mupr11753g00001 588 Pfam Ankyrin repeats (3 copies) 273 355 IPR002110 GO:0005515
Mupr11753g00001 588 Gene3D - 264 404 IPR036770 -
Mupr11753g00001 588 MobiDBLite consensus disorder prediction 562 579 - -
Mupr11753g00001 588 Pfam NPR1/NIM1 like defence protein C terminal 372 574 IPR021094 -
Mupr11753g00001 588 ProSiteProfiles Ankyrin repeat region circular profile. 330 355 - -
Mupr11753g00001 588 Pfam BTB/POZ domain 62 179 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11753g00001 Mupr-Chr11753 8778 13880 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mupr11753g00001 NPR1_like_C 1.2e-97 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11753g00001 K14508 - gmx:100217338 1043.88