Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11742g00004 ATGGTGGATAACGTTGGAGCTGGCAGTTCCTCTAATGCTGAGAACAGTGGCATCAGGGAACAAGACAGGTTGTTGCCAATCGCCAATGTTGGGAGGATCATGAAGCAGATTTTACCACCGAACGCAAAAGTCTCAAAGGAGTCCAAGGAAACAATGCAAGAGTGTGTGTCAGAGTTCATAAGCTTTGTGACCAGTGAGGCGTCGGAGAAGTGCAGGAAGGAAAGAAGGAAGACTGTGAACGGAGATGACGTATGCTGGGCCTTGGGGTCGCTTGGTTTTGATGACTATGCAGAGCCCTTGAGAAGATTTGAGATCTATATCAATCCTGACCTTAATAGGTGCTGA 345 0.4754 MVDNVGAGSSSNAENSGIREQDRLLPIANVGRIMKQILPPNAKVSKESKETMQECVSEFISFVTSEASEKCRKERRKTVNGDDVCWALGSLGFDDYAEPLRRFEIYINPDLNRC 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11742g00004 114 PRINTS CCAAT-binding transcription factor subunit A signature 71 89 - -
Mupr11742g00004 114 PRINTS CCAAT-binding transcription factor subunit A signature 90 108 - -
Mupr11742g00004 114 PRINTS CCAAT-binding transcription factor subunit A signature 52 70 - -
Mupr11742g00004 114 MobiDBLite consensus disorder prediction 1 20 - -
Mupr11742g00004 114 ProSitePatterns NF-YB/HAP3 subunit signature. 55 71 IPR003956 GO:0005634|GO:0006355|GO:0043565
Mupr11742g00004 114 Gene3D Histone, subunit A 13 107 IPR009072 GO:0046982
Mupr11742g00004 114 MobiDBLite consensus disorder prediction 1 18 - -
Mupr11742g00004 114 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 11 103 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mupr11742g00004 114 SUPERFAMILY Histone-fold 21 102 IPR009072 GO:0046982
Mupr11742g00004 114 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 24 88 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11742g00004 Mupr-Chr11742 21721 22313 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11742g00004 18 103 CCAAT-HAP3 Transcription Factor Family AT2G47810 79.070 3.80e-50 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mupr11742g00004 CBFD_NFYB_HMF 1e-26 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11742g00004 K08065 - gmx:100786046 192.971