Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11742g00002 ATGCTGAAATTTCACACCCACATAAGTCTTGTCTGCGCCAAGGGTTTCACATTCACAACCCTAAATCGGAACCCTTTTGTTCAACTCCAATTTCTCAATTTCAAATTCTGCACTGCCACCTCGCACCCACACCCTTTTGTGGTGTCCTACCTCATCAACGACTGTGGCTTCTCCCAAGAAACCGCTGTCAAAGCTTCCCTCAAGCTCCGTTTCCGAGACCCCCAAAAGCCCGATTCAGTTCTCTCCTTCTTCCGAAACCACGACTTCTCCAACTCTCAAATATGCCATATCCTCCAAAGGGAACTCCAGCTACTTTCATGCGACGCCCAAAAGGTACTGTTGCCAAAGTTTCAATTTTTGCGTTCAAAAGGTGCTTCTTCCCTTGACATTGTTCGCATGATCACCGCTGCCCCTTCACTCCTTAAAAGAAGCTTGCAGAATCATATAATCCCAGCGTATGAACTTGTAAGAGGGTTCCTCCAATCCGACAAGCAAATCATTGATTTTCTTATTGATAATCCTTATTTACTTTATGATAGTCGTGTTGCCCCTAACGTCGAATTGTTGCTTGATAATGGAGTTACCCACTCAAACATTGCTAAGTTGCTCCAGAGATGGCCTAATATTCTCTGCTCTGCTAACTTGTTAAGGACGGTTAAGGAATTGAAGCAAATGGGCTTCGATGCTTCAACTTCAACTTTTTGCATAGCATTGCTTGCCAAAAGGACTGTAAACAAAACCAGATGGGGTGAGAAGATTGACACTTTTAAGAGGTGGGGGTGGTCCCAAGAACAAGTTCTTCTAGCATTTAGGAGGCAGCCTTATTGTATGTTGTCATCCCCTCATAAAATTAATGCTGTCTTTAGTTATTGGGTTGAACATGTAGGTTTTGACTCTGTGGACCTTGTAAAAGCTCCAGGAATTTTTCTATTGAGTATCCGGAAGAGGATTGCTCCAAGGGCTTCGGTTTTACAATTTCTTATTTCAAAAGGTCTCGTAGAAAAGGATGCAAGCTTAAATACGCCATTTGTTCTGACTGAGAAGTTGTTCCTGGAAAAGTATGTGAAACGTTTTAAGGACGATTCTTCTCATCTGTTAAAGCTGTACAAGGAAAAAACGTGTCTTGAAAATGACAGGGACAACACTTATTCTTCTCATCTGTTGAAACTGGAGAAGAGCCAAGGGGAGAGAACTAAAGCATTTTGTGAAACCCTAAATCTGTCCGGGACCTGGTCCTTGGCACGTCTCCACTGA 1254 0.429 MLKFHTHISLVCAKGFTFTTLNRNPFVQLQFLNFKFCTATSHPHPFVVSYLINDCGFSQETAVKASLKLRFRDPQKPDSVLSFFRNHDFSNSQICHILQRELQLLSCDAQKVLLPKFQFLRSKGASSLDIVRMITAAPSLLKRSLQNHIIPAYELVRGFLQSDKQIIDFLIDNPYLLYDSRVAPNVELLLDNGVTHSNIAKLLQRWPNILCSANLLRTVKELKQMGFDASTSTFCIALLAKRTVNKTRWGEKIDTFKRWGWSQEQVLLAFRRQPYCMLSSPHKINAVFSYWVEHVGFDSVDLVKAPGIFLLSIRKRIAPRASVLQFLISKGLVEKDASLNTPFVLTEKLFLEKYVKRFKDDSSHLLKLYKEKTCLENDRDNTYSSHLLKLEKSQGERTKAFCETLNLSGTWSLARLH 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11742g00002 417 PANTHER CGI-12 PROTEIN-RELATED 46 357 IPR003690 GO:0003690|GO:0006355
Mupr11742g00002 417 SMART mt_12 200 228 IPR003690 GO:0003690|GO:0006355
Mupr11742g00002 417 SMART mt_12 167 195 IPR003690 GO:0003690|GO:0006355
Mupr11742g00002 417 SMART mt_12 299 333 IPR003690 GO:0003690|GO:0006355
Mupr11742g00002 417 SMART mt_12 95 126 IPR003690 GO:0003690|GO:0006355
Mupr11742g00002 417 SMART mt_12 131 162 IPR003690 GO:0003690|GO:0006355
Mupr11742g00002 417 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Mupr11742g00002 417 FunFam Mitochondrial transcription termination factor-like 145 362 - -
Mupr11742g00002 417 Gene3D Transcription termination factor 3, mitochondrial 146 361 IPR038538 -
Mupr11742g00002 417 Pfam mTERF 81 229 IPR003690 GO:0003690|GO:0006355
Mupr11742g00002 417 Pfam mTERF 180 350 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11742g00002 Mupr-Chr11742 9478 11270 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mupr11742g00002 mTERF 7.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11742g00002 K15031 - gmx:102667698 554.673