Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11729g00004 ATGGGAATAGCCAGGAAATGTTCATATTGTGGTAACTTGGGTCACAATGCAAGGACTTGTAAAAATTTCAGTCACCGACAACTAAAGCTCTTCGGAGTGAAACTTGACGTTAATTCTTCTTCATCATCATCATTATCCTCGAATTCTTTTTCATCACCTTCATATTCTGCCATCAAAAGAAGTTTCAGCACGAACTACTTGTTGTCTTCATGGACCTCAGCGTCTGTACCCTCCTCCTCTTCCTCTTCCTCCCCTTCCCTGTTTGGTGCAAATGAAAATTCTGATAGTTACTTACTCGGTGCCGACAGCCTCGTATCAACAATTCAAGACACAAAAAAAGGTGTGCCGTGGACAGAGGAGGAGCACCGGATATTTCTTGTAGGGCTTGAGAAGCTTGGGAAGGGAAACTGGAGAGGCATATCTAAAAGTTTTGTGACTACAAGAACACCTACTCAAGTCGCCAGTCATGCACAAAAATATTTTCTCCGTCACTCTCAGAATAGCTTCAATAGAAGAAAACACCGTCCCAGCCTGTTCGATTGGCTTTCGCATCCTCATTCAGTGCTGAATTGGCCTACCACTTCAACTTCAACTAATTGCACTGTTCAGAGCGCGCCCCCAGATTTAGAACTCAAACTTGCAACTCCCACGCCATTGGAGATAACAGATAGCTTCATGCTCCCTCAGGCCTTTTAA 696 0.4397 MGIARKCSYCGNLGHNARTCKNFSHRQLKLFGVKLDVNSSSSSSLSSNSFSSPSYSAIKRSFSTNYLLSSWTSASVPSSSSSSSPSLFGANENSDSYLLGADSLVSTIQDTKKGVPWTEEEHRIFLVGLEKLGKGNWRGISKSFVTTRTPTQVASHAQKYFLRHSQNSFNRRKHRPSLFDWLSHPHSVLNWPTTSTSTNCTVQSAPPDLELKLATPTPLEITDSFMLPQAF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11729g00004 231 Gene3D - 117 166 - -
Mupr11729g00004 231 ProSiteProfiles Zinc finger CCHC-type profile. 5 22 IPR001878 GO:0003676|GO:0008270
Mupr11729g00004 231 PANTHER TRANSCRIPTION FACTOR KUA1 5 186 - -
Mupr11729g00004 231 SUPERFAMILY Homeodomain-like 111 165 IPR009057 -
Mupr11729g00004 231 CDD SANT 116 161 IPR001005 -
Mupr11729g00004 231 Pfam Myb-like DNA-binding domain 116 161 IPR001005 -
Mupr11729g00004 231 NCBIfam myb-like DNA-binding domain, SHAQKYF class 112 163 IPR006447 GO:0003677
Mupr11729g00004 231 FunFam transcription factor MYB1R1 115 166 - -
Mupr11729g00004 231 ProSiteProfiles Myb-like domain profile. 109 161 IPR001005 -
Mupr11729g00004 231 SMART sant 113 163 IPR001005 -
Mupr11729g00004 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 109 165 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11729g00004 Mupr-Chr11729 27679 29590 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr11729g00004 Myb_DNA-binding 8.3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11729g00004 - - gmx:100806176 330.872