Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11729g00002 ATGGAGAGTGATATGTACATTGCTCCACTGGACATCTCTGGCCGAGACGCTACAGTAATAGATGAAGTTTCCCAACATTCCACCTCAAATCCTCTCATTCAGTGCTATTCACTTGACCTTAACAACCAATCCCACATCATAAATGGAATTTCAATGCTTTCTGGAGAGCCAGGTGAACCTATAAGTAATGTCCATGCTGATGCTTGCTTCATTAATCCTTCAATTATTGCTGACTCTTCACAAGGAAAGACTATTGTAGGAGATTTCACAAATCCCATGGAGAACTCTGAACTTCAAGAGCATTTAGTTGGAGGAATGTCAATTACTCCCTCTTCCCTTGCTGCCATTCTTGCTGCTAGAATTGGTCTTGAAGAAAATTTGGAGAATTCATCAGCCTTGCCCCCCTCACTCTGCTCAATGGGGGCACTGGGGTCATTCTTCAACAATTTGCATGGTACTTCAAGCCTTCTGTCTGCAACTTTCGAGGACTGTGGTTACAATGAAGTTCATAGTAAGTGGAATGTCAACAAGTTTCCGAAGGCTGCAGAGATTGATGGAACTTGTCACCCTTATTCATCTATAGCAAACCTGGATCCAGATGGATGGGCATCATCAAATGTTGCAAACATGACCAGTCATGCTTACCATTCCTCTAACTTTAGTAAGGAACTTTCTCTAAGTCTTGCAACATCTACAACCACAGGACAGTGCTCAGAGGTGAGTTGCTCTAATGTGACCCCATGCATGAATGGAACCATGTCAGTATTGGAGCAAGCCTCTTGCAGCAGTAGTAGGGAACTTTCTATGGGTGGTAATAAATATGTACAGTTTTCACCAGAAGTACTGGAATCGAGATATCTTGTTGGGATTCAAGAGATACTTGCTCAAATTGCAAGATATTCATTTGAAAATCTAGAACAGTTAAATTATTCAGCTGCTGGTAATAGAGCAGGTGGAAACAAGCCAACTTCAGGTTTCCCACCCAAGAGAAGGATATTGATAGATCACAATGGAAATTCTATGTATGAAGCTCATGCAGAGTCTCCATTGGAAAGGCATGCTGCTGAATCAAAGAAAGCCCAACTGCTGACACTTCTACAACTGGTGGACAGTCGATATAGCCAGTGTTTGGATGAGATACACACTGTTGTATCGGCATTCCATGCGGCGACAGAGTTGGACCCACAAATACATGCACATTTTGCTCTTCAAACCATCTCTATCCTTTACAAGGACCTACGAGAGAGGATCAGCAACTATATTCTTGCCATGGGATCAAATTTCAACAACTCGTGCTCAGAAGAGAATGAATGGTCTGTTGAAACTTCATTCCTTCAAAAGCAATGGGCTCTCCAGCAGTTGAAAAGAAAAGATCAGTTATGGAGGCCCCAAAGAGGCTTGCCTGAGAGATCCGTTTCAGTTCTACGGGCTTGGATGTTTCAGAATTTCCTGCATCCGTATCCTAAAGATGCAGAGAAGCATTTACTTGCAGTAAAAAGTGGGTTGACAAGAAGCCAGGTATCCAATTGGTTTATAAATGCTCGTGTTCGGCTGTGGAAACCTATGATTGAAGAGATGTATGCTGAACTGAATAAAAGAAAGGCTTGTCGGAATGAAGAAGGAATGCAGAGCAACCACGGAAACAGGATAAGCATGAGTAATCAAAGGTTTAATGTTAACTAA 1683 0.4219 MESDMYIAPLDISGRDATVIDEVSQHSTSNPLIQCYSLDLNNQSHIINGISMLSGEPGEPISNVHADACFINPSIIADSSQGKTIVGDFTNPMENSELQEHLVGGMSITPSSLAAILAARIGLEENLENSSALPPSLCSMGALGSFFNNLHGTSSLLSATFEDCGYNEVHSKWNVNKFPKAAEIDGTCHPYSSIANLDPDGWASSNVANMTSHAYHSSNFSKELSLSLATSTTTGQCSEVSCSNVTPCMNGTMSVLEQASCSSSRELSMGGNKYVQFSPEVLESRYLVGIQEILAQIARYSFENLEQLNYSAAGNRAGGNKPTSGFPPKRRILIDHNGNSMYEAHAESPLERHAAESKKAQLLTLLQLVDSRYSQCLDEIHTVVSAFHAATELDPQIHAHFALQTISILYKDLRERISNYILAMGSNFNNSCSEENEWSVETSFLQKQWALQQLKRKDQLWRPQRGLPERSVSVLRAWMFQNFLHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVRLWKPMIEEMYAELNKRKACRNEEGMQSNHGNRISMSNQRFNVN 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11729g00002 560 SMART prehox3 275 419 IPR006563 -
Mupr11729g00002 560 CDD homeodomain 461 522 IPR001356 GO:0003677
Mupr11729g00002 560 Pfam Associated with HOX 281 418 IPR006563 -
Mupr11729g00002 560 SMART HOX_1 461 525 IPR001356 GO:0003677
Mupr11729g00002 560 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 215 543 - -
Mupr11729g00002 560 ProSiteProfiles 'Homeobox' domain profile. 458 521 IPR001356 GO:0003677
Mupr11729g00002 560 SUPERFAMILY Homeodomain-like 463 529 IPR009057 -
Mupr11729g00002 560 Gene3D - 464 543 - -
Mupr11729g00002 560 Pfam Homeobox KN domain 478 517 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11729g00002 Mupr-Chr11729 7144 9501 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11729g00002 223 534 Homeobox Transcription Factor Family AT4G32980 56.962 5.10e-105 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mupr11729g00002 POX 2.4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11729g00002 - - gmx:100820354 964.14