Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11720g00005 ATGGAGGGAAAGGAGCAAGACGTTTCCTTGGGAGCCAACAAATTCCCAGAGAGGCAACCCATTGGCACTACGGCTCAGACCCAAGATGGTGGCAAGGACTACACAGAGCCACCACCGGCTCCGCTATTCGAGCCATCCGAACTCACTTCATGGTCCTTCTACCGCGCCGGGATAGCCGAGTTCGTGGCCACTTTTTTGTTCCTCTACATTACCATCTTAACTGTCATGGGTGTCAACAGGGCTGACAGTAAGTGTGCCACCGTTGGTATCCAAGGTATTGCTTGGGCCTTCGGTGGCATGATCTTCGCTCTCGTCTACTGCACCGCTGGAATATCTGGAGGACACATAAACCCTGCTGTGACATTCGGGCTGTTCTTGGCGAGGAAATTGTCGTTGACCAGGGCGCTGTTCTACATGGTGATGCAGGTGCTGGGTGCCATCGTTGGCGCTGGTGTGGTCAAAGGTTTCGAGGGAAAAACCTTCTATGGGAAACACAACGGTGGTGCCAACTTTGTTGCCCCCGGTTACACCAAAGGTGATGGACTTGGTGCTGAGATTGTTGGCACCTTTATCCTTGTGTACACCGTGTTCTCAGCCACCGATGCCAAGCGTAACGCTAGAGACTCACACGTCCCTCTTTTGGCACCTTTGCCAATTGGGTTCGCTGTCTTCTTGGTGCACTTGGCCACCATCCCAATCACTGGAACCGGTATCAACCCTGCACGAAGTCTCGGTGCTGCCATAATCTTCAACAAAGACCTTGGTTGGGATGATCACTGGATTTTCTGGGTTGGACCTTTCATTGGAGCAGCTCTCGCGGCTCTTTACCACCAAGTCGTAATCAGAGCCATTCCCTTCAAATCCAAGTGCCAAATCGAAGCTCCGAACATGGCGGCGAGCGATCGCACAGTGTTGCAGTTCTCTTCTTCCTCGCAAAGCTTAACCGCGAAGGTCCACCCTCTGGTTATTTTCAACATCTGCGATTGCTACGTTCGACGCCCTGACCAAGCCGACCGCGTCATCGGAACCCTACTCGGTTCCGTACTTTCCGATGGAACCGTCGATATCCGCAATTCCTATGCCGTTCCTCACAACGAGTCTATCGAGCAGGTTGCTTTGGATATAGAGTACCACCACAATATGTATTCAACTGGTCTTGGAGTAACTGGTGGTAGTGCATTGATCCATGAATTTTATTCTCGAGAAGTACCCAATCCCATACACTTGACTGTTGATACAGGATTTACAAATGGAGGGGGTACCATTAAAGCATATGTTTCTAACAATTTATCTCTTGGAGAACGACAAATTGCTGCACAGTTTCAAGAAATTCCATTAGATCTTCGTATGGTGGAAGCTGAGCGAATTGGATTTGATACGCTGAAGTCAACCTCAGTTGACAAAATTCCCTCAGATTTAGAAGGGATGGAAGCATCAATGCAACATCTACTAGTCTTGATTGATGACATCTACAAATATGTTGACGATGTTGTGGAAGGGCGAGTTGCACCAGACAACAAAATTGGGAGATCTATATCAGATGCTGTAGGTTCCCTTCCCAAAGTGTCCCCATCAGTTTTTGATAAGCTTGTGAATGATAGCTTGCAGGATCACTTGCTCTTGCTTTATTTATCTAGCATCACAAGAACGCAGCTTAGCTTGGCCGAAAAATTGAACACAGCTGCTCAGATTCTGTGA 1698 0.4865 MEGKEQDVSLGANKFPERQPIGTTAQTQDGGKDYTEPPPAPLFEPSELTSWSFYRAGIAEFVATFLFLYITILTVMGVNRADSKCATVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQVLGAIVGAGVVKGFEGKTFYGKHNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPLLAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDLGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKSKCQIEAPNMAASDRTVLQFSSSSQSLTAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLSDGTVDIRNSYAVPHNESIEQVALDIEYHHNMYSTGLGVTGGSALIHEFYSREVPNPIHLTVDTGFTNGGGTIKAYVSNNLSLGERQIAAQFQEIPLDLRMVEAERIGFDTLKSTSVDKIPSDLEGMEASMQHLLVLIDDIYKYVDDVVEGRVAPDNKIGRSISDAVGSLPKVSPSVFDKLVNDSLQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11720g00005 565 ProSiteProfiles MPN domain profile. 316 431 IPR037518 -
Mupr11720g00005 565 Pfam Major intrinsic protein 47 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr11720g00005 565 FunFam Eukaryotic translation initiation factor 3 subunit F 304 466 - -
Mupr11720g00005 565 CDD MPN_eIF3f 317 558 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mupr11720g00005 565 FunFam Probable aquaporin PIP1-2 40 295 - -
Mupr11720g00005 565 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 13 285 IPR034294 -
Mupr11720g00005 565 MobiDBLite consensus disorder prediction 1 39 - -
Mupr11720g00005 565 SUPERFAMILY Aquaporin-like 47 282 IPR023271 -
Mupr11720g00005 565 SMART pad1_6 315 430 IPR000555 GO:0005515|GO:0008233|GO:0008237
Mupr11720g00005 565 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 313 383 IPR000555 GO:0005515|GO:0008233|GO:0008237
Mupr11720g00005 565 ProSitePatterns MIP family signature. 115 123 IPR022357 -
Mupr11720g00005 565 Gene3D Glycerol uptake facilitator protein. 40 294 IPR023271 -
Mupr11720g00005 565 Pfam Maintenance of mitochondrial structure and function 452 558 IPR024969 -
Mupr11720g00005 565 CDD MIP 55 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr11720g00005 565 Gene3D Cytidine Deaminase, domain 2 303 466 - -
Mupr11720g00005 565 PRINTS Major intrinsic protein family signature 97 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr11720g00005 565 PRINTS Major intrinsic protein family signature 260 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr11720g00005 565 PRINTS Major intrinsic protein family signature 134 153 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr11720g00005 565 PRINTS Major intrinsic protein family signature 184 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr11720g00005 565 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr11720g00005 565 PRINTS Major intrinsic protein family signature 220 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr11720g00005 565 NCBIfam MIP family channel protein 59 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11720g00005 Mupr-Chr11720 32704 40976 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11720g00005 1 289 Major Intrinsic Protein MIP AT4G23400 85.467 6.11e-170 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11720g00005 K09872 - gmx:100791447 567