Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11720g00004 ATGGAAGAGGACACCATGTCAGGCTTTTGTTTTAGAGGTGCAAGTGTTGGTGGTAACAGTGGCACTAAGTGTGGGCGTTGGAATCCAACTACTGAACAGGTTAAGGTTCTCACTGAACTGTTCAGTTCTGGACTCCGCACTCCAACCACTGATCAGATTCAAAAGATCTCTAATCAGCTTAGTTTTTATGGTAAGATTGAGAGCAAGAATGTGTTCTATTGGTTTCAGAACCATAAGGCTAGGGAAAGACAGAAGCGTCGCAAGGTTGATATTCATAGACAAAACTCTATCTCCGTCAATTCTTTTACACAAAATTTTACTCAGCTATATGAGGTTTCTCAGCCCGAGAGGGTGATTGAGACTCTACAACTCTTTCCCTTGAACTCCTTTGGTGAATCAGAATCAAAGAATATGAGGGTCCATGCAAGTGAATGTTGCAGGGATAATACCATGTTTTCATACACAGTGGGGGAACAAATGGATCACCCACCATTGGATCTTCGCTTGAGTTTT 513 0.4211 MEEDTMSGFCFRGASVGGNSGTKCGRWNPTTEQVKVLTELFSSGLRTPTTDQIQKISNQLSFYGKIESKNVFYWFQNHKARERQKRRKVDIHRQNSISVNSFTQNFTQLYEVSQPERVIETLQLFPLNSFGESESKNMRVHASECCRDNTMFSYTVGEQMDHPPLDLRLSF 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11720g00004 171 Gene3D - 23 91 - -
Mupr11720g00004 171 SMART HOX_1 22 89 IPR001356 GO:0003677
Mupr11720g00004 171 Pfam Homeodomain 24 84 IPR001356 GO:0003677
Mupr11720g00004 171 FunFam WUSCHEL-related homeobox 11 23 91 - -
Mupr11720g00004 171 ProSiteProfiles 'Homeobox' domain profile. 20 85 IPR001356 GO:0003677
Mupr11720g00004 171 CDD homeodomain 26 86 IPR001356 GO:0003677
Mupr11720g00004 171 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 18 95 IPR044555 GO:0003700|GO:0099402
Mupr11720g00004 171 SUPERFAMILY Homeodomain-like 25 87 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11720g00004 Mupr-Chr11720 23691 24307 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11720g00004 5 171 Wox Gene Family AT3G11260 55.914 4.02e-60 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mupr11720g00004 Homeodomain 2.8e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11720g00004 - - gmx:100791433 304.293