Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11719g00002 ATGGGCAAAGCCTCTAGTTCTTCCTCCTCATCTATCACCAGCTTCAGGAACCCTTCCAACTCAACTGCATCCTCTCTCACACACCAAAATAGTGAAGACCTTCGCACAGATCTTAGGCTTGGACTCAGCATTTCTGCCACTCAACATGTTGGCTCTTCTTTTTCAGGGGGGTACTGGCAACCGATGCAGCCACATCTAAGTAGTTCACAAGCTACTGAAGTGAATGATTGCAGCGATCATAGCAGCTTCTTTGTGAAGGTGTACATGGAAGGCATTCCGATTGGTAGAAAACTCAACTTGTTAGTTCATGATGGCTACCACGAGTTAGTAAAGAGCCTTGAACAAATGTTTGACACTACCATTCTATGGGGGACTAAGATGGACGGAGTGCAACCAGAAAGATGCCATGTTCTAACTTATGAAGATGGAGAAGGAGATTTGATTATGGTTGGGGATGTCCCTTGGGAGATGTTCTTATCAGCTGTAAAAAGGTTGAAGATCACAAGGGTCGATACATTCGGGTGA 525 0.4495 MGKASSSSSSSITSFRNPSNSTASSLTHQNSEDLRTDLRLGLSISATQHVGSSFSGGYWQPMQPHLSSSQATEVNDCSDHSSFFVKVYMEGIPIGRKLNLLVHDGYHELVKSLEQMFDTTILWGTKMDGVQPERCHVLTYEDGEGDLIMVGDVPWEMFLSAVKRLKITRVDTFG 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11719g00002 174 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 36 170 IPR003311 GO:0005634|GO:0006355
Mupr11719g00002 174 Gene3D - 76 173 - -
Mupr11719g00002 174 SUPERFAMILY CAD & PB1 domains 78 167 - -
Mupr11719g00002 174 ProSiteProfiles PB1 domain profile. 82 172 IPR000270 GO:0005515
Mupr11719g00002 174 MobiDBLite consensus disorder prediction 1 30 - -
Mupr11719g00002 174 Pfam AUX/IAA family 53 169 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11719g00002 Mupr-Chr11719 9384 10538 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11719g00002 86 167 B3 DNA Binding Superfamily AT4G23980 39.024 1.85e-12 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mupr11719g00002 AUX_IAA 1e-28 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11719g00002 K14484 - gmx:100781660 310.842