Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11686g00002 ATGGTGGTGATTGATGAAAAGAACCGAGTTCATGCGATTAGGAGGGACATGGTGAAATTTCAACAAAATGATCAAGCTGTAACTGTGGCATATTTTGGAGAGGAGTTGCATAACGATAAACAAAATAAGGTAATGGAGAATAGATACAAGTCATTGAACAATCAAATAAAGCAACCAATTATGATAAAATTTGGGCATGGTATTGCTTCTAGTTCCACTAAGGTTGCAATAGAAGGAACACCCTCTCGTGGTGAGGCCATGTCATCTGCTATTCTTCAAGCACAAGAGGTCCAATCAAATTTGGAACCAGAATTCCCTAATTTTGTGAAGTCTTTAGTTAGATCACATGTTGCTAGTTGTTTTTGGATGGGGTTGCCTGTGTCATTTTGTAAAAGAAACTTATCGGATAAGGATACAACAATCATTTTGGAAGATGAATATGGTAAAGAATACAAGACCAAATACATTGCATGTAAGGCAGGATTGAGTGCTGGTTGGAGACAATTTTCTGTTGTACACAAATTGCAAGAGGGTGATGCAGTGGTTTTCCAATTAGTTGAACCTACTAAATTTAAGGTTTATATAATAAGAGCTAATATTACGAGGGGATTAGATGGGACCCTCATGAATCTTGATAGAAAAGATAATGCTGATACTAATGTTGTGACATGTAATAGCTCAAAGAGAAAGCATGGTAAATTTGTCCCACTAGATGTCCAAAAGAAAAATAAGACCGACATGTCAAGATTGAAACCTAAGGTTAGGCAGTCAGCAGAACAATCTGAAAATGATAGTGAAGAAGCTCTCTCAGAAGTTATGGAGGATTTTAAAATGTTTAAATTCAATGATGTGAAAGGTTTTGAAAATTTTAGCATCATAGTTGATGGAATTCCAATAGATATTGAATTCTCCACTAAGGTTCGAAACAAGTACTACAAGCTATGTTGTAGTCAACATGCCTTTCTCCATGACAATCTCATCAAAGGAATGAACTACAAATTGATTGTTGGAATTATATCTGAAATTGTTAACATTGCTGACGCCATAAAAGTTAGTGTAATATGTACCCCATGTGTTGAATTTGCTAATTGGGACAAAACTTTACTTGCCTTTGAGAATTTAGGCATGAATGTTGAATTTCTAAGAATTCAGTTACATCAACTTGTAAGCATTGTTTATGAGAAAAATGATGCCTCAGAGACCAAAAAATAA 1212 0.3507 MVVIDEKNRVHAIRRDMVKFQQNDQAVTVAYFGEELHNDKQNKVMENRYKSLNNQIKQPIMIKFGHGIASSSTKVAIEGTPSRGEAMSSAILQAQEVQSNLEPEFPNFVKSLVRSHVASCFWMGLPVSFCKRNLSDKDTTIILEDEYGKEYKTKYIACKAGLSAGWRQFSVVHKLQEGDAVVFQLVEPTKFKVYIIRANITRGLDGTLMNLDRKDNADTNVVTCNSSKRKHGKFVPLDVQKKNKTDMSRLKPKVRQSAEQSENDSEEALSEVMEDFKMFKFNDVKGFENFSIIVDGIPIDIEFSTKVRNKYYKLCCSQHAFLHDNLIKGMNYKLIVGIISEIVNIADAIKVSVICTPCVEFANWDKTLLAFENLGMNVEFLRIQLHQLVSIVYEKNDASETKK 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11686g00002 403 MobiDBLite consensus disorder prediction 246 262 - -
Mupr11686g00002 403 ProSiteProfiles B3 DNA-binding domain profile. 108 199 IPR003340 GO:0003677
Mupr11686g00002 403 Gene3D - 87 200 IPR015300 -
Mupr11686g00002 403 MobiDBLite consensus disorder prediction 246 265 - -
Mupr11686g00002 403 CDD B3_DNA 106 197 IPR003340 GO:0003677
Mupr11686g00002 403 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 73 203 IPR044837 -
Mupr11686g00002 403 SUPERFAMILY DNA-binding pseudobarrel domain 101 199 IPR015300 -
Mupr11686g00002 403 SMART B3_2 108 199 IPR003340 GO:0003677
Mupr11686g00002 403 Pfam B3 DNA binding domain 108 198 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11686g00002 Mupr-Chr11686 17793 21544 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11686g00002 85 199 B3 DNA Binding Superfamily AT5G42700 50.435 9.77e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mupr11686g00002 B3 2.1e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11686g00002 - - gmx:100819237 590.112