Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11685g00006 ATGAGTCTGAAAGGCTTGGTATCAATTGTCATCAATTTAATTGGTCTAGCTGAGGGACCAAGGAGCAACGATGTCCCTTTACCCTCTTACATGATATCATCTGAATCTGCAGCATCCAATTTTAATGAGGATAGTTGGTGTTGTGTGTGCTTGTCGAGGTTAAAAGCCAAAGATGAAATTCGTGTCCTTCCTTGCTCCCACAAGTTCCACAAGATTTGTGTAAATAGATGGCTTAAGGGTCGCCACAAAACATGTCCACTCTGCCGTTTCTCAATGGGACCCCAGGACAAGTCTCATCGTGCCGAAATGTTCACCGAAGAGATGTTAATATGGTTTTCTTCTTTCCATGTAGCTGATCCTACTATAACATCCTTAGTCTCAGAGCTATCAAAATGGGTTAAGAAGTTAACATCAACTAAACTCTCTTCCTTTACGTAA 438 0.4132 MSLKGLVSIVINLIGLAEGPRSNDVPLPSYMISSESAASNFNEDSWCCVCLSRLKAKDEIRVLPCSHKFHKICVNRWLKGRHKTCPLCRFSMGPQDKSHRAEMFTEEMLIWFSSFHVADPTITSLVSELSKWVKKLTSTKLSSFT 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11685g00006 145 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 24 96 IPR013083 -
Mupr11685g00006 145 PANTHER TARGET OF ERK KINASE MPK-1 39 95 - -
Mupr11685g00006 145 SMART ring_2 47 88 IPR001841 -
Mupr11685g00006 145 Pfam Ring finger domain 47 89 IPR001841 -
Mupr11685g00006 145 SUPERFAMILY RING/U-box 41 95 - -
Mupr11685g00006 145 ProSiteProfiles Zinc finger RING-type profile. 47 89 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11685g00006 Mupr-Chr11685 63200 64191 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11685g00006 14 89 C3H Transcription Factor Family AT4G26580 43.210 2.38e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11685g00006 - - gmx:100809233 220.705