Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1167g00004 ATGGCTCTCGACCAGCCTTCCAATCCCAACTCCGTTGACGGGGCGGGTAACGGCGCCACGCCGTGTTCCGCCGCGGACGGCGGCGACGACGGCAGGCCGGCGGCGAGGCTGCCGCGGTGGACGCGGCAGGAGATTCTGGTGCTGATTCAGGGGAAGAGCGACGCCGAGGGCCGGTTCAGGCCGGGGCGCGGCTCCGGTGGCTCCGGCTCGGCGTTCGGCTCGAGCGAGCCGAAATGGGCGTTGGTGTCCGCGTACTGCAAGAAGCACGGCGTGAACCGGGAACCGGTGCAGTGCCGGAAGCGGTGGAGCAACCTTGCCGGCGATTACAAGAAGATCAAGGAGTGGGAGTCTCAGGTCAGGGACGAAACGGAGTCGTTTTGGCTCATGAGGAACGATTTGCGGAGGGAGAGGAAATTGCCTGGTTATTTTGACAGGGAAGTGTATAATATTCTCGATTCGCCATCCACAGCGGCCGCGGCGGAGACTCCGGTGGCGGCTCCGGCGGGGGATGAGGAGGTACACTTGTATGATAGTAATCGGAGGGTCGGGGGTGAGGATGGCTTGTTCTCTGATTCTGAGAAGGACGAGGTTTTACTTTTAGCCGCTGCCAAGGATGTTGCTGCACCTGTTCCTATCTCAGGTTCGAGATTCAACTTAGTGGGAAAAGGTTTGGTTGATATTATTGTTGTTGGTATTAGAAGCAATATCAACCGCTCCTCCAAGGCTGCGAAGGGGAAGGCAATGGTCAAGGATCAAAGGTTCTGCTTTGACAATCACAGTGTCAAGGACTTAGCTGGTGCTACCAATGAGAAACGGCCAGCCCTAAATCCAGAAATGGGTTCTACATCTCAAGGGGGACGGAAGAGGAAGCGGTTAGCGACCGATGGAGAGGAAGAAACTTTGCAAAGTCAATTAATTGATGTCTTAGAAAAGAATGGCAAAATGCTACGTGACCAACTTGAAGCTCAGAACATCAATTTCCAATTGGATCGCCAGCAGCAGAAAGACACTGCAAGTAACATAGTTGCTGTACTTGATAAGCTTGCAGATGCTCTAGGGAGAATTGCTGATAAATTGCTATGCATTCCCGAGCAATCAAATCCCTTATTAACGGTCTTGAATCGCAGCTTGGGTATCAAACTAGATTTGACAAATGTTCCTCTGTAA 1167 0.5347 MALDQPSNPNSVDGAGNGATPCSAADGGDDGRPAARLPRWTRQEILVLIQGKSDAEGRFRPGRGSGGSGSAFGSSEPKWALVSAYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESQVRDETESFWLMRNDLRRERKLPGYFDREVYNILDSPSTAAAAETPVAAPAGDEEVHLYDSNRRVGGEDGLFSDSEKDEVLLLAAAKDVAAPVPISGSRFNLVGKGLVDIIVVGIRSNINRSSKAAKGKAMVKDQRFCFDNHSVKDLAGATNEKRPALNPEMGSTSQGGRKRKRLATDGEEETLQSQLIDVLEKNGKMLRDQLEAQNINFQLDRQQQKDTASNIVAVLDKLADALGRIADKLLCIPEQSNPLLTVLNRSLGIKLDLTNVPL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1167g00004 388 Coils Coil 306 337 - -
Mupr1167g00004 388 ProSiteProfiles Myb-like domain profile. 32 106 IPR001005 -
Mupr1167g00004 388 MobiDBLite consensus disorder prediction 1 17 - -
Mupr1167g00004 388 MobiDBLite consensus disorder prediction 1 38 - -
Mupr1167g00004 388 MobiDBLite consensus disorder prediction 266 296 - -
Mupr1167g00004 388 Gene3D - 40 111 - -
Mupr1167g00004 388 Pfam Myb/SANT-like DNA-binding domain 39 129 IPR044822 -
Mupr1167g00004 388 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 5 359 - -
Mupr1167g00004 388 MobiDBLite consensus disorder prediction 56 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1167g00004 Mupr-Chr1167 26781 31236 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1167g00004 39 114 Trihelix Transcription Factor Family AT1G33240 32.895 3.60e-06 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mupr1167g00004 Myb_DNA-bind_4 8.8e-12 CL0123