Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1167g00003 GGTTTGAGTTCGGGACCAAATCAAAGTGAACTCGAGGGCCCTGCAAATGGTTGTGTTGCTGTTCGAGACTTCGATTACGAGATCGACTATTCACGATTCGATAATGCTAAACCATACCTACTCTTAGACCGACACCAACTCTACCAACTTGCGAATCCTCGCTTCGAATCAAAATGCAATTCGCCAAGCTCGATGACTCTCCTATGTTCCGCAAGCAGATTTATGGTATGTGTATGTACTACTGCTACACATGGAGAGGGAAAGTGCCAGAATCTGGAAGTGAATCTGGGTGAGTTAGTCTACAGTTTGTTGGTCTCTGAGATACAATGCATGGAGGAAAGTGCTGAATCTTTAAGAGAGAGAAGTTTAAAATTTTACAAAGGATGTAGAAAATACACGTACACTTTAATTGCTTTCACTTTTGTACCTTCTAGTGAAGGACTTGGGGAGGCATATGATGGAGACATTGCATTTGCAAGTGCCCTTGAAACTTTTGGTGGTGGGCATAATGATCCAATCAGTGTGGCTTTTGGAGGCCCTGTTATGACTAAATTCACCATAGCCTTGAGAGAAATTGGGACATACAAGGAAGTCCTTCGATCACAGGTTGAGCATATGTTAAATGACAGATTGCTTCAGTTTGTCAATATGGATTTGCAAGAGGTGAAGGAAGCACGGAAGCGCTTTGACAAGGCTAGCCTTATTTATGACCAGACTCGTGAAAGGTTTCTGTCACTGAGAAAAGGCACAAAAACTGATGTAGCTACTGCCCTAGAAGAGGAGCTTCATAGTGCAAGATCTACATTTGAGCAAGCTCGGTTTAATCTGGTTACTGCCTTGTCAAATGTTGAAGCAAAGAAGAGATTCGAATTTTTGGAAGCAGTCAGTGGGACCATGGATGCACATCTTCGTTACTTCAAACAGGGGTATGAATTGTTGCACCAAATGGAGCCATATATTAACCAGGTCTTGACTTATGCTCAGCAATCAAGAGAAAGGTCCAATTATGAGCAGGCAGCCCTAAATGAAAGAATGCAAGAGTACAAGCGGCAGATTGATCGGGAGAGTAGGTGGGCTTCAAATGGTTCTAATGGGTCTCCTAATGGAGATGGAATACAAGCCATTGGTAGAAGTTCACATAAGATGATAGAGGCAGTAATGCAATCTGCTGCAAAGGGAAAGGTTCAAACTATTCGACAAGGTTATCTCTCAAAGCGTTCCTCAAACTTGAGGGGTGACTGGAAAAGGAGGTTTTTTGTTCTTGATAGTCGGGGAATGCTGTATTACTACCGTAAACAGTGCAGCAAATCATCTGGGTCTAGCAGTCAACATTCTGGCCAGAGGAATAGTTCCGAGCTTGGTTCTGGACTTTTAAGTCGATGGCTGTCTTCTCATCATCATGGTGGAGTACATGATGAGAAATCTGTTGCTCATCACACTGTGAACCTGCTTACATCAACAATCAAAGTAGATGCTGACCAATCAGATTTGAGGTTTTGCTTCCGGATCATTTCACCAACAAAGAACTACACTTTGCAGGCAGAGAGTGCACTGGACCAAATGGATTGGATTGAAAAAATCACTGGTGTTATTGCCTCATTACTGAGTTCTCAAATTCCTGAAAGGATGTTGCTTGCCAGCCCAATGGGAAGTGGTCATCATAGGTCTACCAGTGAGAGTAGTTCTTTTGAAAGTTCAGACTTTGATCACTCTGCTGTTGAAGAATGTGCTGCTGATAGAAGTCTTGCTTCTGCACATCTGGAACGCCCCTCAAGAAGTTTGCAACAGCAACGATCCTGTACTAAAAGTGAGAAGCCAATTGATGTGTTGCGAAGAGTTTGTGGGAATGATAAATGTGCTGATTGTGGTGCTCCAGAACCTGATTGGGCATCACTAAATCTTGGTGTTCTTGTTTGCATTGAGTGTTCTGGTGTACATCGTAACCTTGGTGTGCACATATCAAAGGTCAGGTCTCTTACGTTGGATGTTAAAGTGTGGGAACCTTCTGTCATAAGTTTATTTCAGTCTCTTGGGAATACTTTTGCCAACTCAGTCTGGGAGGAATTGTTACAATCAAGAAATAGTGCCTTTCAGGTTGATCTTGTCCCTACAGGGTTAAGCAAGACCGATAAACCACTGATGTTCTTCATGACCAAACCTTGTCTATCTGATTCCCTTTCTGTGAAGGAAAAGTTCATCCATGCAAAGTATGCAGAGAAGCATTTTGTTCGCAGACCAAAGGACAATCAACGTCTCTTGGTAGCACAACAGATCTGGGAGGCTGTTCATGCTAATGACAAAAAAGCTGTATACCGTTACATTGTAAATTCTGATGTTGACGTTAATGTTGTTTATGAGCCAGCATGTAGCAGTTCCCTAACCCTTGCCAATGTAATGCTATTACAAGAGCAGACTAGCCATGATCACAGCTCTACTTTAGCAGGGAAGACATTGGACTGGTCCTCTACTAAAGAAGGCCAGGTCATGAACAATCCAGATGGGTGCACCCTACTTCACCTTGCCTGTGAAACTGCAGATATTGGCATGGTGGAGCTCCTCCTACAGTATGGTGCAAATGTTAATGCAACTGATTCGAGAGGTCAAACACCATTACATCGCTGTATTCTCAAAGGCAGATCTGCATTTGCAAGATTAATGCTTTCGAGGGGAGCCGATCCTCGAGCTGTGGATGAGCAGGGAAGAACCCCTATTGAGCTTGCTGCAGAATCAAATGCTGGTGACAGAGAAATCCATGCTCCATTGACTGATTCTAATGGATGA 2781 0.4319 GLSSGPNQSELEGPANGCVAVRDFDYEIDYSRFDNAKPYLLLDRHQLYQLANPRFESKCNSPSSMTLLCSASRFMVCVCTTATHGEGKCQNLEVNLGELVYSLLVSEIQCMEESAESLRERSLKFYKGCRKYTYTLIAFTFVPSSEGLGEAYDGDIAFASALETFGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQFVNMDLQEVKEARKRFDKASLIYDQTRERFLSLRKGTKTDVATALEEELHSARSTFEQARFNLVTALSNVEAKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLTYAQQSRERSNYEQAALNERMQEYKRQIDRESRWASNGSNGSPNGDGIQAIGRSSHKMIEAVMQSAAKGKVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSSSQHSGQRNSSELGSGLLSRWLSSHHHGGVHDEKSVAHHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQIPERMLLASPMGSGHHRSTSESSSFESSDFDHSAVEECAADRSLASAHLERPSRSLQQQRSCTKSEKPIDVLRRVCGNDKCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVISLFQSLGNTFANSVWEELLQSRNSAFQVDLVPTGLSKTDKPLMFFMTKPCLSDSLSVKEKFIHAKYAEKHFVRRPKDNQRLLVAQQIWEAVHANDKKAVYRYIVNSDVDVNVVYEPACSSSLTLANVMLLQEQTSHDHSSTLAGKTLDWSSTKEGQVMNNPDGCTLLHLACETADIGMVELLLQYGANVNATDSRGQTPLHRCILKGRSAFARLMLSRGADPRAVDEQGRTPIELAAESNAGDREIHAPLTDSNG 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1167g00003 926 Coils Coil 101 121 - -
Mupr1167g00003 926 Gene3D - 748 921 IPR036770 -
Mupr1167g00003 926 Pfam Ankyrin repeats (many copies) 836 886 IPR002110 GO:0005515
Mupr1167g00003 926 ProSiteProfiles Ankyrin repeat profile. 833 865 IPR002110 GO:0005515
Mupr1167g00003 926 SUPERFAMILY PH domain-like 397 549 - -
Mupr1167g00003 926 ProSiteProfiles ARF GTPase-activating proteins domain profile. 604 750 IPR001164 GO:0005096
Mupr1167g00003 926 SMART PH_update 397 534 IPR001849 -
Mupr1167g00003 926 PANTHER CENTAURIN/ARF 104 923 IPR045258 GO:0005096
Mupr1167g00003 926 SUPERFAMILY Ankyrin repeat 763 911 IPR036770 -
Mupr1167g00003 926 PRINTS HIV Rev interacting protein signature 635 652 IPR001164 GO:0005096
Mupr1167g00003 926 PRINTS HIV Rev interacting protein signature 616 635 IPR001164 GO:0005096
Mupr1167g00003 926 PRINTS HIV Rev interacting protein signature 658 679 IPR001164 GO:0005096
Mupr1167g00003 926 Gene3D - 389 542 IPR011993 -
Mupr1167g00003 926 SUPERFAMILY ArfGap/RecO-like zinc finger 604 745 IPR037278 -
Mupr1167g00003 926 Pfam Putative GTPase activating protein for Arf 607 744 IPR001164 GO:0005096
Mupr1167g00003 926 ProSiteProfiles Ankyrin repeat profile. 866 898 IPR002110 GO:0005515
Mupr1167g00003 926 MobiDBLite consensus disorder prediction 357 373 - -
Mupr1167g00003 926 CDD BAR_SFC_plant 107 319 IPR035670 -
Mupr1167g00003 926 Pfam BAR domain of APPL family 180 336 IPR004148 GO:0005515|GO:0005737
Mupr1167g00003 926 SUPERFAMILY BAR/IMD domain-like 107 419 IPR027267 -
Mupr1167g00003 926 Gene3D Arfaptin homology (AH) domain/BAR domain 103 355 IPR027267 -
Mupr1167g00003 926 MobiDBLite consensus disorder prediction 892 926 - -
Mupr1167g00003 926 MobiDBLite consensus disorder prediction 352 374 - -
Mupr1167g00003 926 Pfam PH domain 398 531 IPR001849 -
Mupr1167g00003 926 Coils Coil 331 351 - -
Mupr1167g00003 926 ProSiteProfiles Ankyrin repeat region circular profile. 866 898 - -
Mupr1167g00003 926 SMART arf_gap_3 604 750 IPR001164 GO:0005096
Mupr1167g00003 926 FunFam ADP-ribosylation factor GTPase-activating protein AGD1 586 751 - -
Mupr1167g00003 926 SMART ANK_2a 866 895 IPR002110 GO:0005515
Mupr1167g00003 926 SMART ANK_2a 833 862 IPR002110 GO:0005515
Mupr1167g00003 926 ProSiteProfiles PH domain profile. 396 532 IPR001849 -
Mupr1167g00003 926 CDD PH_ACAP 399 536 - -
Mupr1167g00003 926 Gene3D Arf GTPase activating protein 584 747 IPR038508 -
Mupr1167g00003 926 SMART 5bar 91 322 IPR004148 GO:0005515|GO:0005737
Mupr1167g00003 926 CDD ArfGap 607 737 - -
Mupr1167g00003 926 ProSiteProfiles Ankyrin repeat region circular profile. 833 864 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1167g00003 Mupr-Chr1167 13858 23290 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1167g00003 616 744 C2H2 Transcription Factor Family AT4G21160 41.538 2.80e-20 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1167g00003 K12489 - gmx:100789134 1467.21