Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1166g00003 ATGGTTGAAGTGGGTATTTTCCAGATCCGAAGCAGCAGTTTCGACCCATTTGCTGAGGCTAAAGAATCAGATGCCCCCGGGGCGAAGGAGTACGTGCATATCCGCATACAACAGAGGAATGGGAAGAAGAGTCTTACCACAGTGCAAGGCCTGAAGAAAGAGTTCTGTTATGATAAGATCCTCAAAGACCTCAAGAAAGAGTTCTGCTGCAACGGCAATGTCGTCCATGACAAGGAACTTGGCAAGATTATCCAACTCCAAGGTGATCAACGCAAGAACGTTTCTCACTTCCTCCTTCATGCTGCCCTTGTTAGGAAGGACCAGATCAAGATTCATGTATTGATTTTAGCAAATCTAAATTTATAA 366 0.4454 MVEVGIFQIRSSSFDPFAEAKESDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKEFCYDKILKDLKKEFCCNGNVVHDKELGKIIQLQGDQRKNVSHFLLHAALVRKDQIKIHVLILANLNL 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1166g00003 121 Gene3D - 5 113 - -
Mupr1166g00003 121 NCBIfam translation initiation factor SUI1 12 112 IPR005874 GO:0003743
Mupr1166g00003 121 Pfam Translation initiation factor SUI1 29 100 IPR001950 GO:0003743|GO:0006413
Mupr1166g00003 121 CDD eIF1_SUI1 30 112 IPR005874 GO:0003743
Mupr1166g00003 121 PIRSF Transl_init_SUI1_Euk 4 114 IPR005874 GO:0003743
Mupr1166g00003 121 FunFam Eukaryotic translation initiation factor SUI1 4 114 - -
Mupr1166g00003 121 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 12 112 - -
Mupr1166g00003 121 SUPERFAMILY eIF1-like 11 112 IPR036877 GO:0003743|GO:0006413
Mupr1166g00003 121 ProSiteProfiles Translation initiation factor SUI1 family profile. 32 102 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1166g00003 Mupr-Chr1166 16424 17076 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1166g00003 1 112 Eukaryotic Initiation Factors Gene Family AT5G54940 77.679 3.01e-59 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1166g00003 K03113 - gmx:100499676 213.001