Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1165g00002 ATGATTTCCCTTTTGTTTCAGAGCCCAGATTGGGATATGATGCAGGAGCCTTCAGAAATGTTGTTCGAATCACTGTCGAGCAACGATGTTCTTGATCCTCTCTACGATTCTCTTTCTTTCGACATGGTTGACTTCTCCACGGCACCAACAGACAACGAGGCAAAGCAATTAATGGTGAAGTCTCAAGTGCAGAATAAGGAAAGATCATACATAGGTGTGAGGAAAAGGCCTTGGGGAAAATTCGCAGCAGAGATCAGAGACACTACCAGGAATGGCGCAAGGGTTTGGCTTGGAACCTTTGACAGTGTTGAAGCCGCTGCGTTAGCTTATGACCAAGCTGCATTTTGCATGAGAGGCCATAATGCTGTACTCAATTTTCCGGTCAAAACGGTGAAAGAGTCTTTGAAAGAGATTCAATATAGCTGCTGCAATGGTTCTTCTCCTGCACTTGCACTCAAGGAGAGGCACTGCACTCAAAGAAAATTGTCATCAAAGGCTAAAAAGTGTAAAGGAAAAGAGACATCATCATCATCAGAGGCAGCAACACCAAGTGTGATGGTCTTAGAGGACTTGGGAGTTGATTATCTTGAGCAACTTCTAAGCTTATCGGATCAAAGTTCAAGCCCTAGCTACTTCAACTAA 642 0.4393 MISLLFQSPDWDMMQEPSEMLFESLSSNDVLDPLYDSLSFDMVDFSTAPTDNEAKQLMVKSQVQNKERSYIGVRKRPWGKFAAEIRDTTRNGARVWLGTFDSVEAAALAYDQAAFCMRGHNAVLNFPVKTVKESLKEIQYSCCNGSSPALALKERHCTQRKLSSKAKKCKGKETSSSSEAATPSVMVLEDLGVDYLEQLLSLSDQSSSPSYFN 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1165g00002 213 SUPERFAMILY DNA-binding domain 70 128 IPR016177 GO:0003677
Mupr1165g00002 213 PANTHER DNA-BINDING DOMAIN 55 205 IPR044808 GO:0003700|GO:0009873
Mupr1165g00002 213 CDD AP2 70 128 IPR001471 GO:0003700|GO:0006355
Mupr1165g00002 213 PRINTS Ethylene responsive element binding protein signature 93 109 IPR001471 GO:0003700|GO:0006355
Mupr1165g00002 213 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
Mupr1165g00002 213 Pfam AP2 domain 70 120 IPR001471 GO:0003700|GO:0006355
Mupr1165g00002 213 Gene3D AP2/ERF domain 69 129 IPR036955 GO:0003700|GO:0006355
Mupr1165g00002 213 SMART rav1_2 69 133 IPR001471 GO:0003700|GO:0006355
Mupr1165g00002 213 ProSiteProfiles AP2/ERF domain profile. 69 127 IPR001471 GO:0003700|GO:0006355
Mupr1165g00002 213 FunFam Ethylene-responsive transcription factor 2 68 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1165g00002 Mupr-Chr1165 26917 27558 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1165g00002 40 208 AP2-EREBP Transcription Factor Family AT3G23240 50.581 1.03e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mupr1165g00002 AP2 2.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1165g00002 K14516 - gmx:100812017 304.293