Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11658g00001 ATGATGTTCCATTCTCAGGGTGTGTCAAGACATTGTAGTCTCCTTGCTGTCCTGAGTGGTAAATCACGTGACATTAAACAAAAGCAGAAGCAGGGTGCTGCTTCTGAGGATCAACCTCCTTACCCCTTTCCAGAGCTTTCTTCCTCTGGCCGTCTTGAGGTCAAGGTATTGTTCAAACCTACGGCTGATGAACTTTGCCGTGCTCTTGAACAACTGCAGCCAGATTTTGTTTACCTGCAAGGCCAGCAGCTAGAAGATAGGGGAGAAATTGGGCCTCTTGTATGGGAGGATTTTGACCTGTCTGTCCCAGAAGCCTTGTGTGGATTGTTTCCTTCCAAATTACCTAATACTGTTTATTTGGAAACTCCTAAGGGAGAAAAATTGGCAGAGGCACTCCGAATTAAGGGAGTTCCATACACTATCTATTGGAAAAATGAATTTTCAAAGTATGCAGCTTCACATTTTCGTCATTCTTTTTTTGCCGTGGCTCAGAGTACATCCAGCCATACATGGGATGCTTTCCAGCTTGCTCTGGCATCTTTTAGACTATACTGTATACAAAACAATGTCTTACCTTCTAACAGCCAGAAGGGTGCTAGTAAGCTTGGGCCACAAATTCTTGGGGTTCCTCCCAACATTGATGTTAGTCCATGTGTAGCAGACATGAAGGAAGAGGAAAATTCACCTGAGACTATTTCTGCTGTAAAGATATATGATGATGATGTGAACATGAGATTTCTTGTTTGTGGAGTTCCTTGCACATTGGATGCTTGTTTGTTGGGGTCATTAGAGGATGGACTCAATGCTCTTCTATTTACAGAAATACGTGGATGCAAACTTCACAACAGGACAAGTGCTCCACCACCACCTCTCCAGGCAGGAACATTCTCACGTGGTGTAGTGACTATGCGTTGTGATATATCCACATGTAGTTCTGCTCATATATCACTTTTGGTGTCTGGTAGTGCAGATACTTGTTTTAATGATCAGGCATGGCTTTTGGAGAATCACATTAAAAAAGAGCTCATTGAGAAGAGTCAACTTGTTCAGGCATTTCCTAATCATGAACAAAGTAAATCACCTTCTTCCGAGCCTCGAAGATCAGCCTCAGTAGCCTGTGGATCTAGTGTGTTTGAAGTTTGTATGCGAGTTCCTGCATGGGCTTCACAGGTTCTGAGACAGCTTGCACCCAATGTGTCATACCGCAGCCTTGTTATGTTGGGAATTGCTAGTATTCAGGGATTGCCAGTTGCATCTTTTAATAAAGATGATGCTGAACGTCTCCTTTTCTTTTGTACTAGGCAGGAGAAAGAAAACTGTCCTAACGATTATGTTTTCTCTGGGATGCCTAGTTGGCTAATGCCTCCACCACCCAGTCGTAAAAGATCTGAACCATGCTCTAGTACAAAGTCTATTAATGCTAGTGGCCGGGGAATTGAAGATATTGGCAGTCATAGACAGAAATTAAATCTTGCTGCTATGAGGCCAATCCCTCACTCTCATAGACACAAGATTCTCCCCTTTTCTGGATTGTCTGAAGGTGCAAGATATGATGGAGACCATGGAAAATCAAATCAGCCACTTGCTCCAATTAAGCATAATGTTTCAGGCCCTACTTCAGTTACAAATAGGAAATCTGTGTCGAACTCATTTCAATCTCACCAGATTATTTCTTTGAATCCACTACCTATGAAAAAACATGGTTGTGACAGACCTCCAATACGAGTTTGCTCAGAGGAGGAATTCTTGAGGGATGTAATGCAATTTTTGATGCTTCGGGGGCATAATCGTCTAATTCCGCCTGGTGGTCTTGCTGAGTTCCCTGATGCCATTTTGAATGCAAAACGCCTTGACCTGTTCAACTTGTATAGGGAGGTAGTTTCAAGAGGAGGCTTTCATGTTGGAAATGGTATCAATTGGAAAGGACAAGTTTTCTCAAAGATGCGCAATCACACTATGACAAATAGAATGACCGGTGTTGGCAATACACTCAAAAGACATTATGAAACTTATCTCTTAGAATATGAATTATCTCATGATGACGTAGATGGAGAGTGCTGCTTGATGTGTCACAGTAGTGCAGCAGGTGACTGGGTGAACTGCGGTGTATGTGGTGAGTGGGCTCATTTCGGCTGTGATAGGCGGCAGGGACTTGGGGCATTTAAGGACTATGCTAAAACCGATGGGCTGGAGTACGTGTGTCCTCGCTGCAGCGCGTTAAAATTCAGTAAAAAATCCCAAAAAACTGCAAATGGTTATTAA 2262 0.4297 MMFHSQGVSRHCSLLAVLSGKSRDIKQKQKQGAASEDQPPYPFPELSSSGRLEVKVLFKPTADELCRALEQLQPDFVYLQGQQLEDRGEIGPLVWEDFDLSVPEALCGLFPSKLPNTVYLETPKGEKLAEALRIKGVPYTIYWKNEFSKYAASHFRHSFFAVAQSTSSHTWDAFQLALASFRLYCIQNNVLPSNSQKGASKLGPQILGVPPNIDVSPCVADMKEEENSPETISAVKIYDDDVNMRFLVCGVPCTLDACLLGSLEDGLNALLFTEIRGCKLHNRTSAPPPPLQAGTFSRGVVTMRCDISTCSSAHISLLVSGSADTCFNDQAWLLENHIKKELIEKSQLVQAFPNHEQSKSPSSEPRRSASVACGSSVFEVCMRVPAWASQVLRQLAPNVSYRSLVMLGIASIQGLPVASFNKDDAERLLFFCTRQEKENCPNDYVFSGMPSWLMPPPPSRKRSEPCSSTKSINASGRGIEDIGSHRQKLNLAAMRPIPHSHRHKILPFSGLSEGARYDGDHGKSNQPLAPIKHNVSGPTSVTNRKSVSNSFQSHQIISLNPLPMKKHGCDRPPIRVCSEEEFLRDVMQFLMLRGHNRLIPPGGLAEFPDAILNAKRLDLFNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTMTNRMTGVGNTLKRHYETYLLEYELSHDDVDGECCLMCHSSAAGDWVNCGVCGEWAHFGCDRRQGLGAFKDYAKTDGLEYVCPRCSALKFSKKSQKTANGY 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11658g00001 753 MobiDBLite consensus disorder prediction 518 548 - -
Mupr11658g00001 753 SUPERFAMILY FYVE/PHD zinc finger 677 742 IPR011011 -
Mupr11658g00001 753 MobiDBLite consensus disorder prediction 26 47 - -
Mupr11658g00001 753 MobiDBLite consensus disorder prediction 455 478 - -
Mupr11658g00001 753 Gene3D - 574 676 IPR036431 GO:0003677
Mupr11658g00001 753 Pfam ARID/BRIGHT DNA binding domain 579 676 IPR001606 GO:0003677
Mupr11658g00001 753 SUPERFAMILY ARID-like 577 691 IPR036431 GO:0003677
Mupr11658g00001 753 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 4 753 IPR042293 -
Mupr11658g00001 753 SMART ARID_2 573 676 - -
Mupr11658g00001 753 MobiDBLite consensus disorder prediction 529 548 - -
Mupr11658g00001 753 CDD PHD_ARID4_like 686 737 - -
Mupr11658g00001 753 CDD ARID 578 676 - -
Mupr11658g00001 753 ProSiteProfiles ARID domain profile. 576 680 IPR001606 GO:0003677
Mupr11658g00001 753 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 677 745 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11658g00001 Mupr-Chr11658 3462 9865 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11658g00001 2 752 ARID Transcription Factor Family AT3G43240 66.976 0.0 1009
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mupr11658g00001 ARID 4.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11658g00001 - - gmx:100808357 1449.88