Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11649g00004 ATGGCTAGGAGCTGGCTTATTGACATTGGAGGATTTGCAAAGAAAGTGAAAAGCACTACTCTATCTTCAGCTGATCAAATCAAGGATTGTGGAGCATTTCGTGAATGTCCAAACTGTTATTATCATATTGATAACAGTGATGTTTCTACTGAGTGGCCTGGCTTTCCTCTTGGTGTAAAGTTTGATCCTTCTGATGTAGAACTCATAGAACATTTAGCAGCAAAATGTGGCATAGGGAGCACACAGCCACACATGTTTATCAATGAGTTCATCCCAACACTGGAAGGAGACCAAGGTGCTAAGAAAGATGGGAGCTATGTCCATTTCTTCCACAGGACAATCAATGCATATGCAACTGGTCAACGAAAGCGTCGAAAGATTCATCATCAACATGGTTTGACTGAAGAGCATGTGCGCTGGCATAAGACGGGTAAGACAAAAGCTATAATAGAAGATGGAGTACACAAAGGCTTTAAGAAGATCATGGTTCTTTATGTGAGATCTAAGAATGGGTCCAAGCCCTATAAATCCAACTGGGTAATGCATCAGTACCATCTAGGGACAGAAGAAGATGAGAAGGATAGTGAATATGTGGTTTCGAAAATTTTTTATCAACAGCAAAAGCAGACTGAGAAAAATGAGGAGAATTCAATGGCCGAAGTTCCCGACAATATAACATTGCGAACAAGCCCAAGTACTCCAAAACCAAACCCCCCCAATCCGCCGCGTGTGGATTGTGGTGATAACATTGATGAAACTATACTTCTGTCTTCTGCCCAGGATACCAAGACAATCCCTGGAGAATCACATGCCCCACCATCTAGTATTCAGGATCAAGACAATGCTGACAACACCGCATGGTTAGCTGGCGAATCACAGGCTGAGGATAACACTGACTATAATGGCTTGGATGACATATTATTGTGCAAGGAAATCTTAGATTCTTCTGCTCTGTTAATTGATTCTGGATCGGACGCCACCAATCTTGATGACATTGCATACTTCACAAATGAAATGGTTCCAAGCAATAATGTATCTAGCGGAATTTCTGTCCTGGATACACTGGAATTGGATACTCCTCCAGATTTTGATCTTTCTAAATAA 1104 0.4149 MARSWLIDIGGFAKKVKSTTLSSADQIKDCGAFRECPNCYYHIDNSDVSTEWPGFPLGVKFDPSDVELIEHLAAKCGIGSTQPHMFINEFIPTLEGDQGAKKDGSYVHFFHRTINAYATGQRKRRKIHHQHGLTEEHVRWHKTGKTKAIIEDGVHKGFKKIMVLYVRSKNGSKPYKSNWVMHQYHLGTEEDEKDSEYVVSKIFYQQQKQTEKNEENSMAEVPDNITLRTSPSTPKPNPPNPPRVDCGDNIDETILLSSAQDTKTIPGESHAPPSSIQDQDNADNTAWLAGESQAEDNTDYNGLDDILLCKEILDSSALLIDSGSDATNLDDIAYFTNEMVPSNNVSSGISVLDTLELDTPPDFDLSK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11649g00004 367 ProSiteProfiles NAC domain profile. 55 205 IPR003441 GO:0003677|GO:0006355
Mupr11649g00004 367 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 3 292 IPR044799 GO:0003700
Mupr11649g00004 367 MobiDBLite consensus disorder prediction 253 281 - -
Mupr11649g00004 367 MobiDBLite consensus disorder prediction 208 281 - -
Mupr11649g00004 367 Pfam No apical meristem (NAM) protein 56 186 IPR003441 GO:0003677|GO:0006355
Mupr11649g00004 367 Gene3D NAC domain 64 210 IPR036093 GO:0003677|GO:0006355
Mupr11649g00004 367 SUPERFAMILY NAC domain 40 205 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11649g00004 Mupr-Chr11649 18991 23777 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11649g00004 36 225 NAC Transcription Factor Family AT1G28470 46.602 1.78e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr11649g00004 NAM 1.8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11649g00004 - - gmx:100780442 602.823