Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11648g00001 ATGAATACTTTTACTCATGTCCCACCCGGTTTTAGGTTCCATCCAACGGATGAAGAACTTGTTGATTACTATCTTAGGAAGAAAGTTGCTTCAAGGAGGATTGACCTAGATGTCATAAAAGATGTTGACCTCTACAAAATTGAGCCATGGGATCTTCAAGAGATTTGCAGAATAGGAACAGAAGAGCAAAACGAATGGTACTTCTTTAGCCATAAAGACAAGAAGTATCCAACTGGAACTCGCACAAATAGAGCAACTACAGCAGGGTTTTGGAAAGCAACAGGAAGAGACAAGGCAATCTATTCCAAGCATGAACTTATAGGCATGAGGAAAACCTTAGTCTTTTATAAAGGTCGAGCTCCTAATGGACAAAAGTCAGATTGGATAATGCACGAGTATCGCCTTGAAACAGATGAAAATGGCACACCACAGGCAAAAGGATGGGTTGTGTGTAGAGTATTCAAGAAGAGAGTAACAACCATGCGTAAAGTGAACGAGCAAGACTCTTGGTACGATGACCAAGTCTCTTTCATGCAAGACTTGGACTCACCAAAGCAAACCTCTCAATCTAATTTGGTCTACCAACTACCATACCCTTGCAAGAAAGAGCTAGATTTGTCATATCAATTGCCTCGCGACCACTTTCTCCAGCTTCCACTTTTAGAGAGTCCAAAACTGCTTCAATCTGCATCTGCCATGACTCCTAATCCCATGGCAGCATATGTTCTAGACGTAAACCACTCAACTTCTCTGCTTCCCTCAACACTCATACAAGAAGAACATGTTGGTCACCAAAACTTTCAGGCAACGTATGGCAACAACAATTTCAATGATCAAGTAACTGATTGGCGAGTGCTTGACAAGTTTGTTGCTTCACAACTTAGTCAAGATGCATCCAAAGACAATACAGTCAATATCTTTCACGGCACCGACAATGGCAATTGCAATGTACAGTTCAGACATTTGGACAAACAAGAAATAGTGATGCCTCAAGAAAATGCCTCAACATCAAACTCCAGCTGCCCAATTGATTTGTGGAAA 1041 0.4131 MNTFTHVPPGFRFHPTDEELVDYYLRKKVASRRIDLDVIKDVDLYKIEPWDLQEICRIGTEEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHELIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQAKGWVVCRVFKKRVTTMRKVNEQDSWYDDQVSFMQDLDSPKQTSQSNLVYQLPYPCKKELDLSYQLPRDHFLQLPLLESPKLLQSASAMTPNPMAAYVLDVNHSTSLLPSTLIQEEHVGHQNFQATYGNNNFNDQVTDWRVLDKFVASQLSQDASKDNTVNIFHGTDNGNCNVQFRHLDKQEIVMPQENASTSNSSCPIDLWK 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11648g00001 347 FunFam NAC domain-containing protein 16 160 - -
Mupr11648g00001 347 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Mupr11648g00001 347 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Mupr11648g00001 347 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 260 - -
Mupr11648g00001 347 Gene3D NAC domain 16 159 IPR036093 GO:0003677|GO:0006355
Mupr11648g00001 347 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11648g00001 Mupr-Chr11648 11182 12928 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11648g00001 1 347 NAC Transcription Factor Family AT1G12260 57.778 1.85e-134 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr11648g00001 NAM 2.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11648g00001 - - gmx:100809525 607.06