Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11636g00005 ATGGGAAATCGGAAGACAGAAGAGGATAAGATTGAAAGAGCAATTCGGGGTCTTTTAAAACTTCCCGAAAATCGAAGATGTATCAACTGCAATCTTTTGGGACCACAATATGTATGTACAACATTCTCCACATTTGTCTGCACAAATTGCAGTGGGATACATCGAGAGTTTACCCATAGAGTAAAATCCGTGTCAATGGCTAAATTTACTCAAGAAGAAGTCACTGCTCTTCAAGCAGGTGGCAATGAGTGTGGGATCCTCAGCGCCATTCTTACCCTGATTCCTGTAATATACCGAGACTTCGAGATTTCATTAAGCAAGTCTATGTGGAAAAAAGATATTCTGCAGAGTGAGAAGCAGGAGTCCTATGCAAGTAGGAAGAGTAGTTCATTTCAACTTGAGTTCAGAAGTCCTCAATCATGTCCTGCTCCAAGAAGTGATGACGCGAGTGTCAGATATTTGTATGATGAAAGCAGAAGTCCTAAGTATACACAAAAGTATTCGCGGCATGGTGGCCAGGCCAGAAGTCCTATAAAATTTGAAGTTGTTGATGACAGGTTTCGAGATGAGGATTATAGAAAAAGCAGGCTCTCAAATATAGAATCAAAACTGAAGCAAATCTCAATTGATGGTAATAAGAATGTGGAAAGATCCCAACTCCCTGTTGTACTTGCACGTCCTCTTGGGGATATGCCAAGGGTCAATCCTCCACCTTTACAAGTCACACATTCTGAACAAAAAAATAATAATCCAGAAAGCTCCATTGATTTGAGTACTAAGTCTCAGGCTACTCATGCTGCTGCTGGAGTTGGACCAGAAATACCACCTACAACACAATCAAATGAAAATAACTGGGCCATATTTGAAGTTTCAACAGAGAACAATGATCCTAAAACTCCAAACACAGATACGTTGGATCCTTCAACAACAAAGGCAGCATCTGAACCACCAACATCTTCAAAAAGTCATTTAGACCTTTTACTTTTGGAACTGTCGTGCCCTGTGATTCCAAGTGGCATGTCATTAGTCCCCAGTGGTGATAACAATGTTCCAACAACAACTACAACAGTAGAAAATGCCAGTACTTGGGACTTTCCACCTATTTCCATAGGGCAGGCAACTGCATCACCCAACGATACTAGTGTTTGGTCAATTACATCAACCCCAGCCACTGAGTTAGTACAACCTTTTAATGAAGTTCCTCCACAAACTGAAGTTTCACATGCACATAAACCATCAAGCATGCAATATCTTCCTTCTGTACCTGCAGCTTGTAGTTCAACAACACAACCAACAAATTCACCAGTCCAACATGTAGTTTCAAATAATCAGCCATCAGTTGCTCCTAGTACAACTGAATCTTTATGTGCTTTTACTGAACTATCTTCTCAAACTACCTCAAAACCTACTCAAGAAACCAGACCTGATGTTGGCTCCCAGCTCAGTAAAGTAGAGACCAAGTCTAGTGGAAGAAAGGAACTTCCAGAGGACCTTTTTACATCAGGCTACTCATCTGCCCCTGCACCACATGCAGGTTGGCAGAATGTTCAACCTCATGGCATGGGATATGGCATGCAGTATTATCATAATGCAGTGCCTCCCGCAGCCCTTGCCGATGCAGTGAAGTCCTCAAACCCCTTCGATGTAAACGATGGGAGAAGTCTAATCCACGTCTCATCGCTTCCTTGTATGGCATCTTTGCACGGTGTACCGCCAGCTGTATCATCATCCAGCACAGGATTAATGCATGCTTCAAGCCTTGGCTCTATGGCGACAATGGGGTCTCCGTCCCCAAGTTATGCATCCCCAGTTCCTATGGGTGCCTACTTTGATCTTCTTAATGAGAAGCAACCCCCTAGACCACAAAGAGCGGAGAGCTTCAGTGGTGAGATAACTGCTTTTGGATCTCTAGACCCCATTCAACAGTCAAATATGGGATACAACAACCCCAAAACTTCAAATTCTTTTTCCAATACAAGAGGAAATCCATTTGAC 1995 0.4266 MGNRKTEEDKIERAIRGLLKLPENRRCINCNLLGPQYVCTTFSTFVCTNCSGIHREFTHRVKSVSMAKFTQEEVTALQAGGNECGILSAILTLIPVIYRDFEISLSKSMWKKDILQSEKQESYASRKSSSFQLEFRSPQSCPAPRSDDASVRYLYDESRSPKYTQKYSRHGGQARSPIKFEVVDDRFRDEDYRKSRLSNIESKLKQISIDGNKNVERSQLPVVLARPLGDMPRVNPPPLQVTHSEQKNNNPESSIDLSTKSQATHAAAGVGPEIPPTTQSNENNWAIFEVSTENNDPKTPNTDTLDPSTTKAASEPPTSSKSHLDLLLLELSCPVIPSGMSLVPSGDNNVPTTTTTVENASTWDFPPISIGQATASPNDTSVWSITSTPATELVQPFNEVPPQTEVSHAHKPSSMQYLPSVPAACSSTTQPTNSPVQHVVSNNQPSVAPSTTESLCAFTELSSQTTSKPTQETRPDVGSQLSKVETKSSGRKELPEDLFTSGYSSAPAPHAGWQNVQPHGMGYGMQYYHNAVPPAALADAVKSSNPFDVNDGRSLIHVSSLPCMASLHGVPPAVSSSSTGLMHASSLGSMATMGSPSPSYASPVPMGAYFDLLNEKQPPRPQRAESFSGEITAFGSLDPIQQSNMGYNNPKTSNSFSNTRGNPFD 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11636g00005 665 MobiDBLite consensus disorder prediction 226 321 - -
Mupr11636g00005 665 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Mupr11636g00005 665 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Mupr11636g00005 665 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Mupr11636g00005 665 SUPERFAMILY ArfGap/RecO-like zinc finger 12 84 IPR037278 -
Mupr11636g00005 665 Gene3D Arf GTPase activating protein 1 171 IPR038508 -
Mupr11636g00005 665 MobiDBLite consensus disorder prediction 420 503 - -
Mupr11636g00005 665 MobiDBLite consensus disorder prediction 616 665 - -
Mupr11636g00005 665 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 83 IPR001164 GO:0005096
Mupr11636g00005 665 MobiDBLite consensus disorder prediction 274 321 - -
Mupr11636g00005 665 MobiDBLite consensus disorder prediction 420 485 - -
Mupr11636g00005 665 MobiDBLite consensus disorder prediction 239 265 - -
Mupr11636g00005 665 PANTHER ARFGAP/RECO-RELATED 1 83 IPR044820 GO:0005096
Mupr11636g00005 665 Pfam Putative GTPase activating protein for Arf 13 83 IPR001164 GO:0005096
Mupr11636g00005 665 CDD ArfGap_AGFG 12 83 - -
Mupr11636g00005 665 SMART arf_gap_3 12 121 IPR001164 GO:0005096
Mupr11636g00005 665 MobiDBLite consensus disorder prediction 635 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11636g00005 Mupr-Chr11636 22292 31096 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11636g00005 12 82 C2H2 Transcription Factor Family AT4G05330 37.333 2.19e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11636g00005 - - gmx:102660856 834.328