Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11626g00002 ATGGCCATTTTAACCACTCTCTTAGTGCTCTCGTGCTTTCTAGTAGCCACCTTAGCTTCAACACCGAATAGAGATTCAACAAAGGAGTTCAACGCCCTCTCCCCAATCTCAAGCTACATCACCAAGAGTACTCCTCAGAATGTTGTCACCAACACAATAGACTCGTGTTGGCGAGCCAAAACAAATTGGGCTTCTAACCGCCAATCCTTGGCTGATTGTGCAATTGGCTTTGGCCAAGATGCCATAGGAGGAAAGTTCGGGGATATTTACCAAGTCACGGATCCCTCTGATGACCCTGTAGACCCAAAACCTGGCACACTCCGTTATGGTGCAATCCAAACAGAACCCCTTTGGATAACCTTCGAAAAGGACATGGTTATCACGCTGGAGAATGAGCTCATGGTGAATAGCTACAAGACCATTGATGGGAGAGGAGCCAAAGTGGAGATTGCAAATGGGCCTTGCATTACGATACAAGGTGTTAGCCACGTCATCGTTCATGGAATCAGCATTCATGATTGTAAACCGGGTAAGGCTGCCCTCGTGAGGAGCACTCCTGAGCATGTTGGGTATCGTCAAGGCTCTGATGGAGATGCCATTACCATATTTGCCTCCTCCAATGTATGGATTGATCATTGCTTTTTGGCTCGTTGCACCGATGGTCTCCTTGATGTTATCCATGCCTCAACTTCTGTCACCATTTCTAACAATTTCTTTACCCACCACGACAAAGTGATGCTGCTAGGACACAGCGATGAGTACAGTGCGGATAGAATTATGAAAGTAACAGTAGCTTTCAACCGCTTTGCCAGTGGCTTAATAGAAAGAATGCCAAGGTACGTAAGAGTGATTCAATCACTTATTTGGTTGATGACATGCAGGGTGAGATTTGGTTATGCCCATGTAGTTAACAACCGGTATGACGAGTGGCTCATGTATGCCATTGGTGGCAGTGCCGACCCAACCATTTTTAGTGAAGGGAATTATTTTATGGCTTCAAATGATTCTGCTACAAAACAGGTTACCAAGAGGGAAACTAGTGAAAAGTGGAGTAATTGGAAATGGAGGAGTTTTCGGGATGAATTCTTAAATGGTGCTTATTTTGTGCCATCTGGTTATGGAAGTTGCACCCCAATATATTCATCTGCTCAAACTTTTATTGCGGCTCAGGCATCCATGGTGCCTTTATTAACTCTCAATGCAGGGCCATTAGATTGTTTCATTCCATTAGATGAGTTCATTCCATTAGTTGCCTCAACCTTACAAACAAGCATGGCCACCTCTCATTGGCTCCTCTTCCTTTCATGCTTCATACTACACCTTGCCTTTTCAACACACAGTGCAGTCCTAAACAAGATAGACTCTTGCTGGCGGGCCAAATCAAATTGGGCATCAAACCGCCAAGCCTTGGCTGATTCTGCAATTGGCTTTGGCAAAGATGCCATTGGTGGCAAGTACGGACCAATATATACAGTCACGGATCCCTCTGATGACCCCGCAAGCCCAAAACCTGGCACACTTCGTTATGGTGTGATCCAAACACAGCCCCTTTGGATCATTTTTGCCAAAGATATGGTTATTAGGCTCAAGAATGAGCTTATCATGAATAGCTACAAGACCATTGATGGAAGAGGTGCTAAAGTGGAGATAGCAAATGGGCCTTGTATTACCATACAAGGTGTTGCCCATGTTATCATACATGGCATTAGCATCCATGATTGTAAACCAAGCAAGCCTGGCCTTGTAAGGAGCACCCCTTCTCATGTTGGCCATCGTCAAGGCTCCGATGGAGATGGCATTAGCATATTTGCCTCATCAAATGTTTGGGTTGATCATTGTTTTTTGGCTAGATGTGCTGATGGCTTGATTGATGTTATTCATGCCTCCACTGCCATTACCATTTCTAATAATTACTTTACCCAGCATGACAAAGTTATGCTACTAGGACACAGCGACGAATACACAGCAGATAAAATAATGAAAGTAACAATAGCCTTCAACCGATTTGCTAGTGGCCTAATTGAAAGGATGCCGAGGGTAAGATTTGGTTATGCCCATGTGGTGAACAACAAATATGATGGGTGGAAGATGTATGCCATAGGTGGCAGTTCTAACCCAACCATTTTAAGTGAAGGAAACTACTACATAGCTCCGAATAACCCTGCTGGTAAACAGGTTACCAAGAGGGAAATGAAGGGAAAATTGAAGAATTGGAAATGGAGGTCTTCTAAGGATGCATTCCTAAACGGTGCTTATTTTGTTCCATCTGGGTATGGAAGTTGTGCTCCAAATTATTCACCTGCTCAATCTTTTACTGCTGCACCTGCTTCCCTGGTGCCCGTAATAACTCTCAATGCAGGTCCCCTGACTTGTGTTGTTGGTAAAGCATGTTAG 2394 0.4428 MAILTTLLVLSCFLVATLASTPNRDSTKEFNALSPISSYITKSTPQNVVTNTIDSCWRAKTNWASNRQSLADCAIGFGQDAIGGKFGDIYQVTDPSDDPVDPKPGTLRYGAIQTEPLWITFEKDMVITLENELMVNSYKTIDGRGAKVEIANGPCITIQGVSHVIVHGISIHDCKPGKAALVRSTPEHVGYRQGSDGDAITIFASSNVWIDHCFLARCTDGLLDVIHASTSVTISNNFFTHHDKVMLLGHSDEYSADRIMKVTVAFNRFASGLIERMPRYVRVIQSLIWLMTCRVRFGYAHVVNNRYDEWLMYAIGGSADPTIFSEGNYFMASNDSATKQVTKRETSEKWSNWKWRSFRDEFLNGAYFVPSGYGSCTPIYSSAQTFIAAQASMVPLLTLNAGPLDCFIPLDEFIPLVASTLQTSMATSHWLLFLSCFILHLAFSTHSAVLNKIDSCWRAKSNWASNRQALADSAIGFGKDAIGGKYGPIYTVTDPSDDPASPKPGTLRYGVIQTQPLWIIFAKDMVIRLKNELIMNSYKTIDGRGAKVEIANGPCITIQGVAHVIIHGISIHDCKPSKPGLVRSTPSHVGHRQGSDGDGISIFASSNVWVDHCFLARCADGLIDVIHASTAITISNNYFTQHDKVMLLGHSDEYTADKIMKVTIAFNRFASGLIERMPRVRFGYAHVVNNKYDGWKMYAIGGSSNPTILSEGNYYIAPNNPAGKQVTKREMKGKLKNWKWRSSKDAFLNGAYFVPSGYGSCAPNYSPAQSFTAAPASLVPVITLNAGPLTCVVGKAC 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11626g00002 797 Gene3D - 50 405 IPR012334 -
Mupr11626g00002 797 Gene3D - 450 790 IPR012334 -
Mupr11626g00002 797 Pfam Pectate lyase 531 715 IPR002022 -
Mupr11626g00002 797 Pfam Pectate lyase 132 330 IPR002022 -
Mupr11626g00002 797 PRINTS Pollen allergen Amb family signature 676 695 IPR018082 -
Mupr11626g00002 797 PRINTS Pollen allergen Amb family signature 473 490 IPR018082 -
Mupr11626g00002 797 PRINTS Pollen allergen Amb family signature 768 791 IPR018082 -
Mupr11626g00002 797 PRINTS Pollen allergen Amb family signature 596 617 IPR018082 -
Mupr11626g00002 797 PRINTS Pollen allergen Amb family signature 738 762 IPR018082 -
Mupr11626g00002 797 PRINTS Pollen allergen Amb family signature 698 717 IPR018082 -
Mupr11626g00002 797 PRINTS Pollen allergen Amb family signature 532 548 IPR018082 -
Mupr11626g00002 797 PRINTS Pollen allergen Amb family signature 496 521 IPR018082 -
Mupr11626g00002 797 PANTHER PECTATE LYASE 18-RELATED 447 795 IPR045032 GO:0030570
Mupr11626g00002 797 SMART amb_all 524 721 IPR002022 -
Mupr11626g00002 797 SMART amb_all 124 336 IPR002022 -
Mupr11626g00002 797 SUPERFAMILY Pectin lyase-like 51 403 IPR011050 -
Mupr11626g00002 797 SUPERFAMILY Pectin lyase-like 451 788 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11626g00002 Mupr-Chr11626 5369 13213 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11626g00002 449 797 Polysaccharide Lyase AT4G22080 68.481 0.0 521