Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11615g00001 ATGGAAATGGGTGGCGGTGACGGCGAAAGAGGAACTCCGCAACCTCCCAAGGAACTGAATCTGCGACCAGAATGGCGACGGCTAAGTGGAAGCGAGCAGGAGCTGATTCTGCAACCTGAATGGAGGCGACGGAGGCCAAGTGCTCCTTCTTCCGAACCTTCCAATCGCGGCGGCGAAGAAGAGCTGCTTTTCCAACCAGAATGGAGGCGCTCAAAGCCAAGTGCGAATGCTAGCGTTTGGGAACCTGAGTGGAGGCGATCGAGACCAGGACCAACTGCATTCCCGTGGAACCAAAATTACTGTACCCGCAAACCAGGCGCGTCGAGTTCCTATGGCCTTCAAAGAGATTCTGTGGTTCCCAAACTGGAAAAACTACAAATATCGAAACAGTTAGCTGCATCATCTTGTACCCTCGATAAAAAGGATAAAATTTCACCTATTCAGAGACCTGACAATGGTGGCACATTGGCAATTCTAACAAGCAGACTTCGTGTTAATCATTTCCCTGTTAAGTTTGATCCAGAGAGTATGATAATGCACTATAATGTTGGTGTGAAACCTAATGTTTCTTCAAAACTTGGCCAGCCTCAGAAATTATCAAAGTCTGATCTATCTATGATCAGAGAGAAACTGTTTTCTGTTGATCCGGAGAGGTTGCCATTGGAGATGACTGCACATGATGGTGCAAAAAATATTTATAGTGCAGTACCATTACCAGAAGAGACCTTTATTGTGGAGATTTCTGAAGAGGATGAAAAGTTTATTTCATATAGTGTTACCTTAACTCTTGTTAATAAACTCAGGCTTCATAAGTTGATGGACTATCTAAGTGGGCAATACCTCTCTATTCCTAGGGATATTTTACAAGGGATGGATGTGGTGGTGAAAGAGAACCCAGCTAGACGCACTATTTCTGTAGGACGACACTTCTATCCCACAAATCCTCCTGTAGTAATGAAGGATCTTCACCATGGGATAATTGCTGTAGGGGGCTTTCAGCATAGTTTGAAGCCTACATCTCAGGGTCTGTCCTTATGTGTAGACTACTCAGTATTGGCCTTCCGAAAGCAAATGTCAGTCTTAGAATTCTTGTATGAGTGTATTGATAACTTTAAATTGGATGAATTTGAAAAATTCAGGAAATTCGTTGAGGAGGCACTTATTGGATTGAAAGTTAATGTGAGTCATCGTAAATGCAATCGGAAATACATTATTTCAAGATTAACACCTATGATTACAAGGTATGTCACCTTTCCCATTGACAATACCCGTGGCTGGAGTCCCTCAAAGGATGTTAGCCTTCTTACTTTTTTTAAAAACAAATATGACAAGGACATTGTGTACAAAGATATTCCTTGTCTTGATTTAGGGAAAGACAAGAAGAAGAACTATGTACCCATGGAATTCTGTGTTTTAGTTGAGGGCCAAAGATATCCTAAAGAGCGTCTAGATGGTATTTCTGCAAATACATTGAAAGCAATGTCACTAGTTCACCCAAATGAGAGAGAGTGTGCAATACAAAAGATGGTGCAGTCTAGTGATGGACCTTGCGGACATGTCTCACTTACAATGTCTTCATTTGGCAGTGGTGATATTATTCAAAATTTTGGAATGAGTATCAACACAACCATGACAACTATTGTAGGACGTGTAATTGGTCCTCCAGAATTGAAGTTGGGTGATCCAAATGGAAAGATCATCAAATTAACAGTGGATCTGGAGAAATGTCACTGGAATCTTGCTGGAAGATCAATGGTTGAAGGTAAACCAGTTGAGCATTGGGGCATCCTTGATTTCACTAGTTTTGGGCCATATAAGTACAAATTAAGAGGCAAGGAATTCATTCAAAAGCTTATAGGTAAATACAAGAAATTGGGTATACACATGCAGGAGCCCATTTGGTATGAAGAATCTTCAATGAAGATACTTGCGAGTTATGATTTGCTATCTGAATTACTTGAAAAAATTAACAACATTTGTAAATATAATCAAGCCCACCTGCAATTTCTTCTGTGTGTAATGGCTAAAAAAAGTCCTGGTTATAAGTACCTCAAGTGGATTTCTGAGACCAAACTTGGGATAGTGACACAATGCTGCTTGTCTAATAGTGCTAATGAAGGGGAGGACAAATTTTATACTAATCTGGCTCTGAAGATTAATGCCAAGCTTGGAGGCAGTAATGTGGAGCTCAGTAATGGGCTCCCTTACTTTGAGGGTGAAGGACATGTTATGTTTTTAGGGGCTGATGTCAACCATCCTGGTTTTCAGGACACCAGGAGCCCATCTATTGCTGCTGTGGTTGCTACTGTTAATTGGCCTGCTGCAAATCGTTATGCAGCACGTGTTTTCCCACAATACAATCGAAGTGAGAAAATATTGAACTTTGGGGAGGTTTGTCTTGAGCTTGTTGCATGTTATAGGAGGATGAATGGAGTTAGGCCAGAAAGAATTGTTATTTTTCGTGATGGGGTGAGTGAGTACCAGTTTGACATGGTTCTTAATGAGGAACTACTAGATCTGAAGAGGGTATTTAAAAGAATAAGTTACTCTCCAAAAATCACTCTTATTGTAGCACAAAAACGACATCAAACTCGATTTTTTCCAGAGGGTTGGAGGGATGGATCATCCAGTGGCAATATTTTGCCAGGAACAGTTGTGGACACAAAAGTTACACACCCTTTTGAGTTTGACTTTTACCTTTGTAGTTACCATGGAAACTTAGGTACAAGCAAGCCCACTCATTACCATGTCTTATGGGATGAGCACAAGTTTACATCCGATGAATTGCAGAAGCTCATATACGAGATGTGCTTCACCTTTGCAAAGTGCACTAAACCTGTATCATTAGTTCCTCCTGTATATTATGCTGACCTTGCTGCTTATAGGGGACGATTATACCATGAAGCAAGGATTGGGGTGCAATCTCTGAAGTCAACAGCATCTTCATCTTCTAGAGATGCTTCGTCAGTCTCAGGAACAGCTTCATTTGAACAGGGATTTTACACGTTGCATGCTGACCTGGAAAACATAATGTTCTTCATCTAA 3045 0.4105 MEMGGGDGERGTPQPPKELNLRPEWRRLSGSEQELILQPEWRRRRPSAPSSEPSNRGGEEELLFQPEWRRSKPSANASVWEPEWRRSRPGPTAFPWNQNYCTRKPGASSSYGLQRDSVVPKLEKLQISKQLAASSCTLDKKDKISPIQRPDNGGTLAILTSRLRVNHFPVKFDPESMIMHYNVGVKPNVSSKLGQPQKLSKSDLSMIREKLFSVDPERLPLEMTAHDGAKNIYSAVPLPEETFIVEISEEDEKFISYSVTLTLVNKLRLHKLMDYLSGQYLSIPRDILQGMDVVVKENPARRTISVGRHFYPTNPPVVMKDLHHGIIAVGGFQHSLKPTSQGLSLCVDYSVLAFRKQMSVLEFLYECIDNFKLDEFEKFRKFVEEALIGLKVNVSHRKCNRKYIISRLTPMITRYVTFPIDNTRGWSPSKDVSLLTFFKNKYDKDIVYKDIPCLDLGKDKKKNYVPMEFCVLVEGQRYPKERLDGISANTLKAMSLVHPNERECAIQKMVQSSDGPCGHVSLTMSSFGSGDIIQNFGMSINTTMTTIVGRVIGPPELKLGDPNGKIIKLTVDLEKCHWNLAGRSMVEGKPVEHWGILDFTSFGPYKYKLRGKEFIQKLIGKYKKLGIHMQEPIWYEESSMKILASYDLLSELLEKINNICKYNQAHLQFLLCVMAKKSPGYKYLKWISETKLGIVTQCCLSNSANEGEDKFYTNLALKINAKLGGSNVELSNGLPYFEGEGHVMFLGADVNHPGFQDTRSPSIAAVVATVNWPAANRYAARVFPQYNRSEKILNFGEVCLELVACYRRMNGVRPERIVIFRDGVSEYQFDMVLNEELLDLKRVFKRISYSPKITLIVAQKRHQTRFFPEGWRDGSSSGNILPGTVVDTKVTHPFEFDFYLCSYHGNLGTSKPTHYHVLWDEHKFTSDELQKLIYEMCFTFAKCTKPVSLVPPVYYADLAAYRGRLYHEARIGVQSLKSTASSSSRDASSVSGTASFEQGFYTLHADLENIMFFI 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11615g00001 1014 SMART Piwi_a_2 669 967 IPR003165 GO:0003676
Mupr11615g00001 1014 Pfam PAZ domain 364 488 IPR003100 GO:0005515
Mupr11615g00001 1014 Gene3D paz domain 352 478 - -
Mupr11615g00001 1014 SUPERFAMILY Ribonuclease H-like 661 968 IPR012337 -
Mupr11615g00001 1014 SUPERFAMILY PAZ domain 353 512 IPR036085 GO:0005515
Mupr11615g00001 1014 CDD Piwi_ago-like 532 966 IPR045246 -
Mupr11615g00001 1014 Gene3D - 551 731 - -
Mupr11615g00001 1014 SMART DUF1785_2 304 357 IPR014811 -
Mupr11615g00001 1014 Pfam Argonaute linker 1 domain 305 356 IPR014811 -
Mupr11615g00001 1014 MobiDBLite consensus disorder prediction 1 68 - -
Mupr11615g00001 1014 ProSiteProfiles PAZ domain profile. 358 474 IPR003100 GO:0005515
Mupr11615g00001 1014 Pfam N-terminal domain of argonaute 162 295 IPR032474 -
Mupr11615g00001 1014 ProSiteProfiles Piwi domain profile. 669 968 IPR003165 GO:0003676
Mupr11615g00001 1014 Pfam Piwi domain 670 964 IPR003165 GO:0003676
Mupr11615g00001 1014 CDD PAZ_argonaute_like 358 473 - -
Mupr11615g00001 1014 Gene3D - 739 1014 IPR036397 GO:0003676
Mupr11615g00001 1014 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 162 969 - -
Mupr11615g00001 1014 SMART PAZ_2_a_3 358 491 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11615g00001 Mupr-Chr11615 1064 5747 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11615g00001 163 968 Eukaryotic Initiation Factors Gene Family AT1G48410 35.873 1.47e-143 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11615g00001 K11593 - gmx:100783571 1766.9