Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11610g00003 ATGGGCTTTGATATCTCTATCCTAGGGCTTGGTCTTGGTCTTGGACTTGGCCTCCACGATCAGTCATCAGAAAATTGCATGAATAGCAACGAACCCAGGCAGAAGAAAAAGGATGCGAATCAATGCAATAAGGCTTACCCATCACTTACGTTAGGACCACCCGATGATAATCAACAAATTAAAAAGACCGAATCCGATGAATATTACTATTATTTGCATCCACATGCCTCTTCTCCAAGTGCAGTGTCTTCATTTTCCAACTCTTATAGCATCAAGAGAGAGAGAGATCAGTTCGCGGGTGAAGAAATTGAGTTAGAGGTAGAGAAGATTCTATCAAGGGTTGTGGATGTTGATGAAAATGGTAACCCCAAGAAGAAACTTAGGCTCTCCAAACAACAATCTGCAGTCTTGGAAGATAGCTTCAAAGACCATTCTACTCTCTCTCCGAAACAGAAGCAAGAATTGGCAAAGAAACTGAATCTGCGGACTAGACAAGTGGAGGTGTGGTTTCAGAACAGAAGAGCCAGGACAAAACTGAAACAAACGGAAGTGGAGTGTGAGTTACTGAAAAAGTGGTGTGAAACTCTAACTGAGGAGAACAAGATGCTGCAAAAGGAGTTGCAAGAGCTTAAATCGATGAAAGAAACGGTGGGACCCTTTTATATGCAAGTTCCAGTGGCAAGCCTTACAATATGCCCTTCGTGTGAGAGAATTTGCGGTGGCAGCGGCACCACCAACAATGGCTCCTCTCCCACAACAAAGCCTCATCACCACTTCTATAAAAATAACTATACATTTACCCAATCCTCAGCAGCTTGCTAG 822 0.4319 MGFDISILGLGLGLGLGLHDQSSENCMNSNEPRQKKKDANQCNKAYPSLTLGPPDDNQQIKKTESDEYYYYLHPHASSPSAVSSFSNSYSIKRERDQFAGEEIELEVEKILSRVVDVDENGNPKKKLRLSKQQSAVLEDSFKDHSTLSPKQKQELAKKLNLRTRQVEVWFQNRRARTKLKQTEVECELLKKWCETLTEENKMLQKELQELKSMKETVGPFYMQVPVASLTICPSCERICGGSGTTNNGSSPTTKPHHHFYKNNYTFTQSSAAC 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11610g00003 273 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 11 256 - -
Mupr11610g00003 273 SMART halz 180 224 IPR003106 GO:0006355|GO:0043565
Mupr11610g00003 273 SMART HOX_1 122 184 IPR001356 GO:0003677
Mupr11610g00003 273 CDD homeodomain 123 181 IPR001356 GO:0003677
Mupr11610g00003 273 Pfam Homeodomain 124 178 IPR001356 GO:0003677
Mupr11610g00003 273 Pfam Homeobox associated leucine zipper 180 214 IPR003106 GO:0006355|GO:0043565
Mupr11610g00003 273 ProSiteProfiles 'Homeobox' domain profile. 120 180 IPR001356 GO:0003677
Mupr11610g00003 273 MobiDBLite consensus disorder prediction 24 58 - -
Mupr11610g00003 273 Coils Coil 193 216 - -
Mupr11610g00003 273 SUPERFAMILY Homeodomain-like 121 188 IPR009057 -
Mupr11610g00003 273 Gene3D - 128 178 - -
Mupr11610g00003 273 MobiDBLite consensus disorder prediction 41 58 - -
Mupr11610g00003 273 ProSitePatterns 'Homeobox' domain signature. 155 178 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11610g00003 Mupr-Chr11610 37009 38311 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11610g00003 1 273 Homeobox Transcription Factor Family AT4G37790 47.260 1.38e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr11610g00003 Homeodomain 2.7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11610g00003 K09338 - gmx:100790927 356.295