Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11610g00001 ATGGGGAGGGCACCTTGCTGTGACAAAGCAAACGTGAAGAAAGGCCCTTGGTCACCAGAAGAAGACGCCAAACTCAAATCCTACATCGAACAGCACGGAACCGGTGGTAACTGGATTGCTTTGCCACAGAAGATAGGCCTTAAACGATGTGGCAAGAGTTGCCGTCTACGGTGGCTAAACTACCTCCGCCCTAACATCAAACACGGTGGTTTCTCCGAAGAAGAAGACAACATCATTTGCAGCCTTTACATTAGCATTGGAAGCAGGTGGTCGGTGATTGCAGCACAATTGCCAGGAAGAACTGATAATGACATTAAGAACTACTGGAACACAAGGCTGAAGAAGAAGCTTCTAGGGAAGCACCGTAAGGAACTACAGGCACGTAATAAAGGAAACGGTGTCGTTAAGCAGGAGAACAATTCCCCACTCTTGCTTCAGGAAAACAGTGTTCAACAAAAGCCATGTTGGCCACAGATTCCTGTGCTTCCACTTTCACCATATGCAAACCATAGTCCAAGTTTCAACGACCAAGACTCCATTAGAAAACTTCTAATCAAGCTTGGAGGGAGATTCTCCCATGATTATCAACCCATCCTTGATGGGTTGAATGATATTCAATTCTCACACGGTTCTCCCTCACCAATAAAACAAATTCAAGAGGAGCAGGTTCATGTTGGCTCTTCTGGGTGCATGAGCTCTATAGACAACAACCAATTACAGTTTGGTCAGAGTAATGGGTATTGTGCAGCTGAGTTGGTGCAAGGACAAGGCAATTTCAATGCAACAATTGGGGAAATGGTTTCTACTAATGATTATTCTCATGGGTTGGAGTTCTTCTATGGGGAGGAAATGATTACCGATAATAAGATAATGGGTGTTTCTTCGAGTTGTGGGCAAAGTAGTACTAATTGGGGTGAGAGCAGTTCTCTGATGTATCCTCCTCTTGTTGTTTCGAATTACGAGGATGTGCGACAAGAGATGCCACGAGAATGTGCTTTTCAAGAGTTGAGCTACCCGGGGGCGCAATAG 1029 0.4509 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYISIGSRWSVIAAQLPGRTDNDIKNYWNTRLKKKLLGKHRKELQARNKGNGVVKQENNSPLLLQENSVQQKPCWPQIPVLPLSPYANHSPSFNDQDSIRKLLIKLGGRFSHDYQPILDGLNDIQFSHGSPSPIKQIQEEQVHVGSSGCMSSIDNNQLQFGQSNGYCAAELVQGQGNFNATIGEMVSTNDYSHGLEFFYGEEMITDNKIMGVSSSCGQSSTNWGESSSLMYPPLVVSNYEDVRQEMPRECAFQELSYPGAQ 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11610g00001 342 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mupr11610g00001 342 CDD SANT 71 113 IPR001005 -
Mupr11610g00001 342 PANTHER OS09G0431300 PROTEIN 1 249 - -
Mupr11610g00001 342 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Mupr11610g00001 342 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mupr11610g00001 342 FunFam Transcription factor RAX3 70 146 - -
Mupr11610g00001 342 CDD SANT 16 62 IPR001005 -
Mupr11610g00001 342 Gene3D - 7 68 - -
Mupr11610g00001 342 FunFam Transcription factor RAX3 7 68 - -
Mupr11610g00001 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Mupr11610g00001 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mupr11610g00001 342 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Mupr11610g00001 342 Gene3D - 69 143 - -
Mupr11610g00001 342 SMART sant 67 115 IPR001005 -
Mupr11610g00001 342 SMART sant 13 64 IPR001005 -
Mupr11610g00001 342 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11610g00001 Mupr-Chr11610 1516 2967 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11610g00001 1 312 MYB Transcription Factor Family AT3G49690 48.036 8.94e-89 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr11610g00001 Myb_DNA-binding 2.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11610g00001 K09422 - gmx:778079 576.244