Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1160g00002 GTAGAATTGATGAAGGAAGGTGGTGGTGGTGGTAGGAAGCAGGGTGCAGCCTCACCCTGTGCTGCATGCAAGCTTCTAAGGAGAAGGTGTGCCCAGGATTGTGTTTTTGCTCCATATTTCCCAGCAGATGAACCCCAAAAATTTGCAAATGTGCACAAGGTGTTTGGTGCTAGCAATGTCAACAAGATGCTACAGGACCTACCAATGCATCAACGAGGGGATGCAGTGAGTAGCATGGTGTATGAGGCCAATGCCAGAGTCCGAGACCCTGTTTATGGGTGCGTTGGGGCCATATCTTCGCTTCAGCAACAGATTGATGTGCTACAGACCCAATTGGCCCTGGCCCAGGCTGAGGTGGCCCACCTTCGAGTGAGACAAAATAGATGCTTTTCCAATATCGGGCTTAGGCCCACTAGCCCAGCCAATACTGGGTTTCCATCATCCAAGACCTTGGACTCACACCCCAAGCCTATTTTTGACATGGACATGGTGGTGGACCAGGCCAGCTATGGTGGTTCAATGTGGTCATGA 531 0.5104 VELMKEGGGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNIGLRPTSPANTGFPSSKTLDSHPKPIFDMDMVVDQASYGGSMWS 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1160g00002 176 ProSiteProfiles LOB domain profile. 18 119 IPR004883 -
Mupr1160g00002 176 Pfam Lateral organ boundaries (LOB) domain 19 116 IPR004883 -
Mupr1160g00002 176 Coils Coil 98 125 - -
Mupr1160g00002 176 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 16 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1160g00002 Mupr-Chr1160 18428 22480 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1160g00002 4 176 AS2 family AT1G31320 77.011 7.85e-77 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr1160g00002 LOB 1.9e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1160g00002 - - gmx:100794219 325.865