Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11609g00002 ATGGCTTCCTCGCACACTCCAAAATCTGAAAAGAAGAAAACCAAAAACGGAGAAATCTCCAAATCCGAAAGCAAAGCAAAAAAGGATAAAGACATCGAGAAAGAGGAGAACAAGAAGAATAAGAAGCTGAAGCTCAGCAATGGCAATTCAAAACGACAAGACGAGGGATTCGAAAAGGGAGCAGAAGGAGGCGGAGAAGAGGCGAAAACAAACGTGTTTCCAATGAATCGCATCAGGACGATGATTAAGGGTGAGGATCCCGATTTGCGTGTTTCTCAGGAAGCTTTGTTGGCCATCAACAACGCCGCGGAGAAGTTCCTTGAGCAATTCACGCAGGACGCTTATGCATGTTCTGTTCAGGACCGCAAGAAATCCCTCAGTTACAAGCACCTAGCAAATGTTGTTAGTAAGCAGAGAAGATATGACTTTCTTTCTGATTTTGTTCCCGAGAAAGTGAAAGCTGAGGATGCATTAAGAGAGAGAAGTTCAGCAGGAAAAGGAGGA 504 0.4425 MASSHTPKSEKKKTKNGEISKSESKAKKDKDIEKEENKKNKKLKLSNGNSKRQDEGFEKGAEGGGEEAKTNVFPMNRIRTMIKGEDPDLRVSQEALLAINNAAEKFLEQFTQDAYACSVQDRKKSLSYKHLANVVSKQRRYDFLSDFVPEKVKAEDALRERSSAGKGG 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11609g00002 168 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 73 135 IPR003958 -
Mupr11609g00002 168 Gene3D Histone, subunit A 4 150 IPR009072 GO:0046982
Mupr11609g00002 168 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 38 166 - -
Mupr11609g00002 168 MobiDBLite consensus disorder prediction 1 65 - -
Mupr11609g00002 168 SUPERFAMILY Histone-fold 72 151 IPR009072 GO:0046982
Mupr11609g00002 168 MobiDBLite consensus disorder prediction 1 72 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11609g00002 62 132 CCAAT-HAP5 Transcription Factor Family AT1G07980 43.662 2.63e-17 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mupr11609g00002 CBFD_NFYB_HMF 1.3e-12 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11609g00002 - - gmx:100793738 197.978