Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11600g00001 ATGGATTCTAGGCGGCGTAAAAAAGCAGCTATGCAACGCAAGTTGCAACAACTTCGATCGGTTACAAATTCCAGTGCTATGAACAAAGCCTCAATAATTGTGGATGCCACAAGATACATAGAGGAGCTGAAGCAAAAAGTGGATGGTTTGAACTCAGAGCTTGGAACCGCTGAATCATCAATCTCCCAAGACGAACTACCCATGGTCACCGTAGAAACCCTAGAAAGGGGTTTCCTCATTAACGTGTTTTCAGAAAGGAATTGCCCCGGTATGCTTGTGTCAATACTCGACGCTTTCGAAGAACTGGGACTTGATGTGCTTGATGCTAGGGTTTCTTGTGAAGACACTTTCCAGCTTGAAGCTGTTGGAGGAGAAAGTCAAGAGAACGAAAGCATCGACGCGCAAGTGGTGAAGCAAGCAGTGCTGCAAGCAATCCAAAACATGGATTAA 450 0.4533 MDSRRRKKAAMQRKLQQLRSVTNSSAMNKASIIVDATRYIEELKQKVDGLNSELGTAESSISQDELPMVTVETLERGFLINVFSERNCPGMLVSILDAFEELGLDVLDARVSCEDTFQLEAVGGESQENESIDAQVVKQAVLQAIQNMD 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11600g00001 149 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 5 61 IPR036638 GO:0046983
Mupr11600g00001 149 CDD ACT_UUR-ACR-like 89 145 - -
Mupr11600g00001 149 Gene3D - 2 66 IPR036638 GO:0046983
Mupr11600g00001 149 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 146 - -
Mupr11600g00001 149 Coils Coil 33 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11600g00001 Mupr-Chr11600 16800 18684 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11600g00001 3 62 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 40.984 2.15e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11600g00001 - - gmx:100499821 275.018