Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11599g00003 ATGAAAGGCATAGGAGGTGGTGGTGCCATTATTCCACTTCATGGGTGTGGAAATATAAGGGTCTCTAACCCTACCATGTGTTCAGCTGGTCCTCCTTTGACAGCCATAGACAGGTTTTTGTGGGGACAACAAAGCCACTTTCACAAGCAACAGCCACACAACGTTGCAGACCATAGCCATGCAGGGGTTTTGGATGGTTTTGTTGCTTCTTCTGGTGGTTCAGCCTACAAGTTTCTGTGGCCTAATGGTACTCATCATCAAGTAAGTTTTATTGAACAGATTTTTGCAAATGAAGAGGCTCTGAATTGGACACAACAAGCGTGCTTGAAAGAAGATGTGCATGTTTTGGGGAAGATTGTCAAAGGGGTGGGACGAAGACCTAACAAAGGGTCTTCTGTGCCTTTGATCAAAGGACAGTGGAGTGATGAAGAAGACAGGAAATTGTTAAAGTTGGTGAAGCAACATGGTGTAAGAAAATGGTCTCAGATAGCTGAGAATTTGGATGGAAGGGCTGGCAAGCAGTGTCGAGAGAGATGGCATAATCATCTACGGCCTGATATTAAGAAAGATAGTTGGAGTGAAGAAGAGGAGAGGATATTAGTAGAAAGTCATGCCAAGATTGGAAACCGTTGGGCAGAGATTGCAAAGCGCATTCCAGGGAGAACAGAAAATGCAATAAAGAACCATTGGAATGCCACTAAGAGGAGACAAAACTCAAGGAGAAAGAACAAAAGAGCAGGAACCTTAAATGGAAAGCCACTTTCCTCTATACTCCAAGACTACATCAGAGACTTGACTCTCCCCAATACTACTAAAACTACCACTCCCTCTGTGGAACCAATAGTAGCACCAACGAAACACCACCTTGCTTTGCCTCAACTCTCTGACTCTCTCACCAATGATAACTCCTCATCACCACCTCTAATGCCTCAGTCCTATGATGATGAGATGCTCTTCATGCAACAACTTTTCAAGGAGAATTGTGTCAATGTTGAATCTCTTAAGCACTCCAAGAATAGTAATAATAACAACTCTTCAACCTCCTTGGATTGTTATTATCATCATCAAGCTAGTAATAATGATCAGCTTCTCACTGATGTCACTCAATGTGGGTTTGTTCATTCCAACACAAACTCACATAATAACAACATGTGCTTGGATGAGAGTCTCTTCATCTCTAGAAAGACTCCTTCCACTCCAATCAACTACCTTGATTATGATCTCTGTCTCTCTCACTTGCTGAATGGAACTGCTGGTTCATCACTTTGCTATAATTATGAGGGGAATCGTGATTGTTGTGAAGGGAAAAGGGAGATGAATATGATAGAGTTGGTTTGTTCTACAAAATGTTTGCAGCAGCAAGATGAATCTGAAGAACTTAGG 1383 0.4215 MKGIGGGGAIIPLHGCGNIRVSNPTMCSAGPPLTAIDRFLWGQQSHFHKQQPHNVADHSHAGVLDGFVASSGGSAYKFLWPNGTHHQVSFIEQIFANEEALNWTQQACLKEDVHVLGKIVKGVGRRPNKGSSVPLIKGQWSDEEDRKLLKLVKQHGVRKWSQIAENLDGRAGKQCRERWHNHLRPDIKKDSWSEEEERILVESHAKIGNRWAEIAKRIPGRTENAIKNHWNATKRRQNSRRKNKRAGTLNGKPLSSILQDYIRDLTLPNTTKTTTPSVEPIVAPTKHHLALPQLSDSLTNDNSSSPPLMPQSYDDEMLFMQQLFKENCVNVESLKHSKNSNNNNSSTSLDCYYHHQASNNDQLLTDVTQCGFVHSNTNSHNNNMCLDESLFISRKTPSTPINYLDYDLCLSHLLNGTAGSSLCYNYEGNRDCCEGKREMNMIELVCSTKCLQQQDESEELR 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11599g00003 461 ProSiteProfiles Myb-like domain profile. 184 234 IPR001005 -
Mupr11599g00003 461 Gene3D - 190 252 - -
Mupr11599g00003 461 FunFam Transcriptional activator Myb isoform A 136 189 - -
Mupr11599g00003 461 MobiDBLite consensus disorder prediction 232 252 - -
Mupr11599g00003 461 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 132 187 IPR017930 -
Mupr11599g00003 461 Pfam Myb-like DNA-binding domain 140 197 - -
Mupr11599g00003 461 CDD SANT 191 234 IPR001005 -
Mupr11599g00003 461 MobiDBLite consensus disorder prediction 233 247 - -
Mupr11599g00003 461 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 188 238 IPR017930 -
Mupr11599g00003 461 SUPERFAMILY Homeodomain-like 134 230 IPR009057 -
Mupr11599g00003 461 CDD SANT 140 183 IPR001005 -
Mupr11599g00003 461 PANTHER MYB PROTEIN-RELATED 126 335 - -
Mupr11599g00003 461 SMART sant 136 185 IPR001005 -
Mupr11599g00003 461 SMART sant 188 236 IPR001005 -
Mupr11599g00003 461 Gene3D - 136 188 - -
Mupr11599g00003 461 ProSiteProfiles Myb-like domain profile. 137 183 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11599g00003 Mupr-Chr11599 37406 40302 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11599g00003 29 420 MYB Transcription Factor Family AT5G58850 39.012 1.79e-75 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr11599g00003 Myb_DNA-bind_6 7.1e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11599g00003 K09422 - gmx:100786295 546.969