Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11595g00001 ATGTCCAACTCTGACGGACCCACTAACGGCGTCACTACCAACAACGAAGCTGCAATCGTCGAGTCCCAGCGGACCACCCCATCCACTGCGCTCGCGGTCAAGAAGCCGCCGTCCAAGGACCGTCACAGCAAGGTCGACGGCCGTGGACGCCGCATTCGCATGCCGATCATATGCGCAGCACGTGTCTTCCAGCTCACGCGCGAGCTTGGCCACAAGTCCGACGGCCAGACCATCGAGTGGCTCCTTCGCCAGGCCGAGCCTTCCATCATCGCCGCCACCGGCACCGGCACCACTCCGGCCAGCTTCTCCACCGTCTCCGACCACAAGCCCCTCCTCCCTCCCCCCACTCCCTTCATCCTTGGCAAGCGCATACGCCCCGACGACGACGCCGTCTCCAAAGACGACGCTGTCTCGCTCGTCGCCCCGCCCACGCCGCCCGCCCTCTGGACGCTCCCGCCCCGCCCCGACTTTGGCCAGGTCTGGAGCTTCGCCGCCGCAGCTCCGCCGGAACTCGTGTCGGTGTCGCCGCAGAACTCCATGTTCCACCATCACCAGCACCACCACCAGCAACAGCATCAGCAACAAGTCGCCATGGGAGAGGCTTCCGCAGCGAGGCTCGGGAATTACCTTCCCGGCCACCTGAATTTGCTTGCCTCGTTGTCCGGCGGCCACGGGAATTCCGCCCGGCGAGACGACGAGCCTCTTTTGAGTGGAGAAGTCCATGAATTAAGGAATTCAATTGGATTAGTGTTTTCCTGGTTTGGAAAACTGATTAGATGGATTATTGGTGGGAAGGGTCAGGTTCCAATAATTGATGGGGTCCCTGAAATTACACAACGTAGTGAAACTAGCTAG 855 0.6117 MSNSDGPTNGVTTNNEAAIVESQRTTPSTALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSDHKPLLPPPTPFILGKRIRPDDDAVSKDDAVSLVAPPTPPALWTLPPRPDFGQVWSFAAAAPPELVSVSPQNSMFHHHQHHHQQQHQQQVAMGEASAARLGNYLPGHLNLLASLSGGHGNSARRDDEPLLSGEVHELRNSIGLVFSWFGKLIRWIIGGKGQVPIIDGVPEITQRSETS 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11595g00001 284 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 25 197 IPR005333 GO:0003700
Mupr11595g00001 284 Pfam TCP family transcription factor 38 109 IPR017887 -
Mupr11595g00001 284 ProSiteProfiles TCP domain profile. 38 92 IPR017887 -
Mupr11595g00001 284 MobiDBLite consensus disorder prediction 1 48 - -
Mupr11595g00001 284 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11595g00001 Mupr-Chr11595 9750 12702 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11595g00001 9 234 TCP Transcription Factor Family AT5G23280 60.956 1.26e-85 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mupr11595g00001 TCP 2.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11595g00001 K16221 - gmx:100795254 362.459