Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11592g00002 ATGAGAGATATCTGTAGAAACTTCCAGCGAGGCAGTTGTCAATATGGAGAAAGGTGTAGATATTTACATGTACAACAACAGCGAAAATCTAATGTTCATGGGTTTGGAGGACAGAACAGTTCTCAACAACAGCAGAATACCAATCCCTTTGGATTCGGGTCTCACTCTGGCTCACAACAACAGCAGAAGACTAATCCTTTTGGTTTTGGCATGAAGAACAGCCCCCAGTCAAATGGGGGCTTTCATTCTGAGTTTAAACCGAACCAGTTCAAGCCTTTTGAAAACAAATGGAGTCGAGAGTCGTCCAATCCCCAGAATGGTGTTTCACGCCAATCTGATAACAACAACTCCCAACAGGTGAATCATAAATGCACAGATCCTGAGGTCTGCAAGCGCCAGATTGCAGAAGATTTTGAGCAGGAGAAACCGCTTTGGGTACTTACATGCTACAGTCATTGCAAAGGGGCTCCTTGTGACATTGTTGGTGATATTAGCTATGAAGAATTGCGGGCATCGGCTTATGAGGATGCTAAGCGTGGAATGAGCTTGCAATCAATAGTTGAGAAAGAGAGAAATATATTAAAATCCAAGTTGGTTGAGTTTGAGAAACTACTTTCTGAACCTTACAAAATGCCAATAAATTCTTCTCTTGACAGTCAAAAACACCAATCTATTGGAGCCAATACAAATCCTTTTTCAACAACTCAAAATAATGGTCCTTTGTCAGTCTCAAGCTTTAGCCAGCTGGGTACATCATTGAACATGGGTTTTGAAAGGCCCTCTGCACCACTAACAAACACTCTGGCACAGCCTAGTTACTTTGGAAGTGGAGGAAACTCTTTGGCATCCAATGCATTAAACCTAAACAGCAGTGGTGTCTTCAGTGCTCAAAGCAGCTCCAATTCTACACCAGTGGAGTTGACAATGTTTCCGGGTTCTACCCAGCAAACATCCAATGCCTTCAATAACTCTGGTCCCACGACCATGTTTCAAACAACACCAGATGTTCAGTTAATTAAGTCCCAAGAGAATGTGTCAGGAGATGTCAGTATTTGGTTAAAAGAGAAATGGAATCCGGGAGAGATTCCAGAAGAAGCTCCTCCTGATGCTTTTGTA 1116 0.4247 MRDICRNFQRGSCQYGERCRYLHVQQQRKSNVHGFGGQNSSQQQQNTNPFGFGSHSGSQQQQKTNPFGFGMKNSPQSNGGFHSEFKPNQFKPFENKWSRESSNPQNGVSRQSDNNNSQQVNHKCTDPEVCKRQIAEDFEQEKPLWVLTCYSHCKGAPCDIVGDISYEELRASAYEDAKRGMSLQSIVEKERNILKSKLVEFEKLLSEPYKMPINSSLDSQKHQSIGANTNPFSTTQNNGPLSVSSFSQLGTSLNMGFERPSAPLTNTLAQPSYFGSGGNSLASNALNLNSSGVFSAQSSSNSTPVELTMFPGSTQQTSNAFNNSGPTTMFQTTPDVQLIKSQENVSGDVSIWLKEKWNPGEIPEEAPPDAFV 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11592g00002 372 SMART c3hfinal6 1 25 IPR000571 GO:0046872
Mupr11592g00002 372 PANTHER MAKORIN-RELATED 5 320 IPR045072 GO:0000209|GO:0061630
Mupr11592g00002 372 Gene3D - 1 71 - -
Mupr11592g00002 372 MobiDBLite consensus disorder prediction 94 122 - -
Mupr11592g00002 372 MobiDBLite consensus disorder prediction 30 84 - -
Mupr11592g00002 372 MobiDBLite consensus disorder prediction 30 122 - -
Mupr11592g00002 372 SUPERFAMILY CCCH zinc finger 3 27 IPR036855 GO:0046872
Mupr11592g00002 372 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 3 25 IPR000571 GO:0046872
Mupr11592g00002 372 ProSiteProfiles Zinc finger C3H1-type profile. 4 26 IPR000571 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mupr11592g00002 zf-CCCH 5.4e-08 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11592g00002 K14321 - gmx:100814339 574.704