Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11586g00011 ATGTCGAAGTCTAGCAGCGGCACCCCCGCGGTCGCACCGAAGCTCGCGTGGGTTCTCCCGTACGAGACAGAGAACCTGAAGGAGGTGTACACACTGGGCCGGAAGCTGGGCCAGGGCCAATTCGGCACGACGTTCCTGTGCACGCACAACGCCACGGGTCGCACCTTCGCGTGCAAGTCAATCCCGAAACGGAAGCTTCTGTGCAAGGAGGACTACGACGACGTTTGGAGGGAGATTCAGATAATGCACCACTTGTCCGAGCACCCCAACGTCGTCAGGATCCACGGCACCTACGAGGACGCCACGTCGGTTCACCTCGTCATGGAGCTCTGTGAGGGCGGCGAGTTGTTTGATAGGATCGTCAAGAAGGGGCACTACAGCGAGAGACAGGCCGCCAAGTTGATTAAGACCATTGTTGAGGTTGTCGAGGCTTGTCATTCGCTTGGTGTCATGCACAGGGACCTTAAGCCTGAGAACTTTTTGTTCGACACTGTTGAGGAAGATGCCAAGCTTAAAACCACCGATTTCGGCTTGTCTGTCTTCTATAAGCCAGGTGAAACTTTTTGTGATGTTGTTGGAAGCCCATACTATGTCGCACCAGAGGTCTTGCGTAAGCATTATGGACCTGAATCAGATGTGTGGAGTGCTGGTGTTATTTTGTACATCTTATTAAGTGGAGTGCCACCATTTTGGGCTGGTATATACTATATATGTCACATATACTTTATATTATCAATTGTAGATGTAGGCATATTATTGTTTTCTTCATGTGCATCCTTCATCATTGCTAATGCTTTTCTGCAAATTTTGTCATCTCCAGAAACTGAGCAGGGGATTTTCCGACAGATTTTGCTAGGAAGACTTGATTTCCAGTCTGAGCCATGGCCTAGCATTTCTGACAGTGCCAAGGATCTAATTCGAAAAATGCTTGATCGGAATCCAAAAACAAGGCTTACAGCTCACAAAGTACTCTGTCATCCATGGATTGTAGATGACAACATTGCACCAGATAAACCTCTTGATTCTGCTGTTTTATCACGCCTGAAGCAGTTCTCTGCAATGAATAAACTTAAAAAGATGGCTTTGCGTGTTATTGCAGAGAGGCTCTCCGAGGAAGAAATTGGTGGTCTGAAGGAGTTATTCAAGATGATTGATGCAGACAACAGTGGAACTATAACATTGGATGAGCTGAAAGATGGCATGAGGCGAGTAGGATCTGAATTAATGGAGTCTGAAATCAAGGATCTTATGGATGCAGCAGATATTGATAATAGTGGAACACTTGACTATGGTGAATTCATTGCTGCTACGGTCCACTTAAACAAGCTAGAGAGAGAAGAAAATCTGGTGTCAGCTTTCTCCTATTTTGACAAAGATGGAAGTGGTTACATAACCATTGATGAGATACAACAAGCTTGTAAAGAATTTGGTTTGAATGATGTCCATATTGATGAAATTGTCAAGGAAATTGATCAAGACAATGATGGACAGATAGATTATGGGGAATTTGCTGCCATGATGAGAAAGGGCAATGGAGGAATTGGCAGGCGAACCATGAGGAGCACACTCAATTTCAGAGATGCTCTGGGAATTATAGGCCATGGGTCCGATTAA 1614 0.4554 MSKSSSGTPAVAPKLAWVLPYETENLKEVYTLGRKLGQGQFGTTFLCTHNATGRTFACKSIPKRKLLCKEDYDDVWREIQIMHHLSEHPNVVRIHGTYEDATSVHLVMELCEGGELFDRIVKKGHYSERQAAKLIKTIVEVVEACHSLGVMHRDLKPENFLFDTVEEDAKLKTTDFGLSVFYKPGETFCDVVGSPYYVAPEVLRKHYGPESDVWSAGVILYILLSGVPPFWAGIYYICHIYFILSIVDVGILLFSSCASFIIANAFLQILSSPETEQGIFRQILLGRLDFQSEPWPSISDSAKDLIRKMLDRNPKTRLTAHKVLCHPWIVDDNIAPDKPLDSAVLSRLKQFSAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDADNSGTITLDELKDGMRRVGSELMESEIKDLMDAADIDNSGTLDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITIDEIQQACKEFGLNDVHIDEIVKEIDQDNDGQIDYGEFAAMMRKGNGGIGRRTMRSTLNFRDALGIIGHGSD 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11586g00011 537 Gene3D Phosphorylase Kinase; domain 1 32 116 - -
Mupr11586g00011 537 CDD EFh 449 508 IPR002048 GO:0005509
Mupr11586g00011 537 ProSiteProfiles EF-hand calcium-binding domain profile. 408 443 IPR002048 GO:0005509
Mupr11586g00011 537 Pfam Protein kinase domain 30 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11586g00011 537 FunFam Calcium-dependent protein kinase 1 32 115 - -
Mupr11586g00011 537 FunFam calcium-dependent protein kinase SK5 366 438 - -
Mupr11586g00011 537 ProSiteProfiles EF-hand calcium-binding domain profile. 444 479 IPR002048 GO:0005509
Mupr11586g00011 537 ProSiteProfiles Protein kinase domain profile. 30 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11586g00011 537 ProSitePatterns EF-hand calcium-binding domain. 457 469 IPR018247 -
Mupr11586g00011 537 FunFam CDPK-related kinase 3 22 190 - -
Mupr11586g00011 537 SMART serkin_6 30 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11586g00011 537 SMART efh_1 412 440 IPR002048 GO:0005509
Mupr11586g00011 537 SMART efh_1 448 476 IPR002048 GO:0005509
Mupr11586g00011 537 SMART efh_1 482 510 IPR002048 GO:0005509
Mupr11586g00011 537 SMART efh_1 376 404 IPR002048 GO:0005509
Mupr11586g00011 537 FunFam Calcium-dependent protein kinase SK5 442 537 - -
Mupr11586g00011 537 Gene3D - 442 536 - -
Mupr11586g00011 537 CDD STKc_CAMK 29 328 - -
Mupr11586g00011 537 Gene3D Transferase(Phosphotransferase) domain 1 117 369 - -
Mupr11586g00011 537 CDD EFh 377 436 IPR002048 GO:0005509
Mupr11586g00011 537 PANTHER SERINE/THREONINE-PROTEIN KINASE 24 503 - -
Mupr11586g00011 537 ProSitePatterns EF-hand calcium-binding domain. 385 397 IPR018247 -
Mupr11586g00011 537 Pfam EF-hand domain pair 377 437 IPR002048 GO:0005509
Mupr11586g00011 537 Pfam EF-hand domain pair 447 508 IPR002048 GO:0005509
Mupr11586g00011 537 SUPERFAMILY Protein kinase-like (PK-like) 18 347 IPR011009 -
Mupr11586g00011 537 ProSiteProfiles EF-hand calcium-binding domain profile. 372 407 IPR002048 GO:0005509
Mupr11586g00011 537 ProSitePatterns Protein kinases ATP-binding region signature. 36 59 IPR017441 GO:0005524
Mupr11586g00011 537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Mupr11586g00011 537 Gene3D - 370 441 - -
Mupr11586g00011 537 SUPERFAMILY EF-hand 368 509 IPR011992 -
Mupr11586g00011 537 ProSiteProfiles EF-hand calcium-binding domain profile. 482 513 IPR002048 GO:0005509
Mupr11586g00011 537 ProSitePatterns EF-hand calcium-binding domain. 421 433 IPR018247 -
Mupr11586g00011 537 ProSitePatterns EF-hand calcium-binding domain. 491 503 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11586g00011 Mupr-Chr11586 46421 51367 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11586g00011 18 537 EF-hand Containing Proteins AT1G35670 71.511 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mupr11586g00011 Pkinase 1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11586g00011 K13412 - gmx:100805961 941.414