Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1157g00001 ATGTCTAGCAGAAGATCCCGCTCCAGACAATCCGGTGCTTCCGCTGAGATCACAGATGCTCAAATCACCGATCTCGTTTCTAAGTTACAACAACTTATCCCCGAGCTTCGCGCTAGGCGCTCCGACAAGGTTTCGGCTGCTAAGGTATTGCAAGAGACATGCAACTACATAAAAAACTTGCACAGAGAAGTTGATGATCTAAGTGACCGATTATCGGAGCTTTTGGCTAACATGGACTCCAACAGTGCTCAAGCAGACATTATTAGGAGCTTACTTATGGTAGGGTTTGGTTTGTACTTTGTAGACCAACACAAAGGACTACCATCGTTTTGTGGGGACCCATTAAAAGGGTCAAGCTTGAAGCTGACAGTGCCTGTAACATGTGACATACCCCACACCATTTTCGGTTATTTGTTCTTGCCAACCCGTGATATTAATGTTCGCATTAGGACCACAATATAA 462 0.4481 MSSRRSRSRQSGASAEITDAQITDLVSKLQQLIPELRARRSDKVSAAKVLQETCNYIKNLHREVDDLSDRLSELLANMDSNSAQADIIRSLLMVGFGLYFVDQHKGLPSFCGDPLKGSSLKLTVPVTCDIPHTIFGYLFLPTRDINVRIRTTI 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1157g00001 153 Gene3D - 20 89 IPR036638 GO:0046983
Mupr1157g00001 153 FunFam Transcription factor ILI6 7 89 - -
Mupr1157g00001 153 CDD bHLH_AtPRE_like 17 77 - -
Mupr1157g00001 153 PANTHER TRANSCRIPTION FACTOR PRE 1 93 IPR044293 GO:0006355|GO:0040008|GO:0046983
Mupr1157g00001 153 Pfam Helix-loop-helix DNA-binding domain 21 60 IPR011598 GO:0046983
Mupr1157g00001 153 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 21 82 IPR036638 GO:0046983
Mupr1157g00001 153 Coils Coil 57 84 - -
Mupr1157g00001 153 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 6 60 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1157g00001 Mupr-Chr1157 2240 3586 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1157g00001 1 93 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 68.085 1.56e-33 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr1157g00001 HLH 2.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1157g00001 - - gmx:100804830 162.54