Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1156g00003 ATGCAGGAAAACAAGGACCCTGCAATTAAGCTCTTCGGCCAGAAGATTCCCTTTCCCGGGGAAGCCGACGCTCCGGCCATTGCCACCGGCGAAACTGCCTCGCCGCCCACGATGGATGTCGACCAAGAGGAAGACTTTGCTGAGTCAGAGGCTGAAGAAGAGAAAGACAAGGATCAGGAGGGTGAAAAAGTTGGTGAGAAAACGAAAGAAGCTGATCATCGTGGAAATGGTGCAGAGTCTGAGAAGAGCGGAGAGGGTGGTAATGGAATTAATGAGAAGCCAAAGACACCTTCCATAGACGAAGAAACTGCGAAGACAAAAACGGACAAGTCAGAGAACGATCAAAATAACAAAACACTAAAGAAGCCAGACAAAATTCTGCCATGTCCACGGTGCAACAGCATGGACACCAAATTCTGTTACTACAACAATTACAACGTGAATCAGCCGCGTTACTTCTGCAAAGCGTGTCAAAGGTACTGGACCGCCGGCGGCACCATGAGAAACGTGCCGGTGGGTGCGGGGAGGAGGAAGAACAAGACCTCAGCCTCTCACTACCGTCACATCACTATCTCGGAGGCTCTTCAGGCAGCCAGAATCGACGCCCCTAACGGGACCCACATTCCGAATTTCAAAGGCAACGGTAGAGTCCTCAGCTTCGGGCTAGACCCACCAATTTGTGACTCCATGGCGTCGGTACTTACCGGCAGCACCAGAAACGGGTTTCACGCTGTTGAGGATCAGAGAAACAAAGAAAACAATGGTGACGACTGTTCTAGTGTGTCTTCCATTACTGTTTCTAATGAGGAGAGTGGGAAAAGCGCGTCCCAAGAATCAAACAACAACGGTTTCGTTCCTCATGTTCCTCCCTGCATATCTAGTGTTCCTTGGCCATACCCTTGGAACTCTTCAGTTCCTTCAACACCTGCTTTGTGTCCTCCTCCTCCTCCTCCAGGGTATCCCATGTCATTCTACCCCTTATGGAACTGCGGGGTGCCAGGGAATTGGAATATGAACATTCCATGGTTTCCCTCACACCCAAATTCTCCAACACTTGGTAAGCACTCAAGGGACCATTTTCACAAGGAGGAACCGAGGCAGAGAAACGGATCTGTTTTGGTCCCAAAAACATTGAGAATCGATGACCCCAGTGAGGCTGCCAAGAGTTCTATATGGGCAACTTTGGGAATCAAGAATGAGTGTGTCAAAGGGGGTGGCATGTTCAAAGGATTCCAATCCAAGAAGGACGACAAAGACCACGTTGAAACCTCTCCGGTGTTGAGGGCTAACCCTGCAGCATTGTCTAGATCCCTTAATTTTCACGAGAACTCTTGA 1335 0.4959 MQENKDPAIKLFGQKIPFPGEADAPAIATGETASPPTMDVDQEEDFAESEAEEEKDKDQEGEKVGEKTKEADHRGNGAESEKSGEGGNGINEKPKTPSIDEETAKTKTDKSENDQNNKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKTSASHYRHITISEALQAARIDAPNGTHIPNFKGNGRVLSFGLDPPICDSMASVLTGSTRNGFHAVEDQRNKENNGDDCSSVSSITVSNEESGKSASQESNNNGFVPHVPPCISSVPWPYPWNSSVPSTPALCPPPPPPGYPMSFYPLWNCGVPGNWNMNIPWFPSHPNSPTLGKHSRDHFHKEEPRQRNGSVLVPKTLRIDDPSEAAKSSIWATLGIKNECVKGGGMFKGFQSKKDDKDHVETSPVLRANPAALSRSLNFHENS 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1156g00003 444 MobiDBLite consensus disorder prediction 56 80 - -
Mupr1156g00003 444 ProSitePatterns Zinc finger Dof-type signature. 129 165 IPR003851 GO:0003677|GO:0006355
Mupr1156g00003 444 MobiDBLite consensus disorder prediction 41 55 - -
Mupr1156g00003 444 ProSiteProfiles Zinc finger Dof-type profile. 127 181 IPR003851 GO:0003677|GO:0006355
Mupr1156g00003 444 MobiDBLite consensus disorder prediction 255 282 - -
Mupr1156g00003 444 MobiDBLite consensus disorder prediction 246 282 - -
Mupr1156g00003 444 PANTHER CYCLIC DOF FACTOR 2 1 444 IPR045174 GO:0003700|GO:0006355
Mupr1156g00003 444 MobiDBLite consensus disorder prediction 95 124 - -
Mupr1156g00003 444 MobiDBLite consensus disorder prediction 412 444 - -
Mupr1156g00003 444 MobiDBLite consensus disorder prediction 1 124 - -
Mupr1156g00003 444 Pfam Dof domain, zinc finger 124 181 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1156g00003 Mupr-Chr1156 10834 13370 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1156g00003 1 442 C2C2-Dof Transcription Factor Family AT3G47500 48.333 2.05e-121 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mupr1156g00003 zf-Dof 1.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1156g00003 - - gsj:114409713 627.476