Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11565g00003 ATGGAGAGTTGTGGGATTTATGTCGAGTGTGATTGGACTGATCTCTTATGCGTTGAGTTCCTCTTTCAACCATCTATTCGGAGAGTGGAACTTCTGGAAGATCATCCTTTACACTTTCAGCAGCATGATGTTATTTTTGAAGAAATGGAAACATTCCAAGAGTTTTTCGCTGAAAGCTCATGTGCGTGTTCTGGTTTTGTTGCTTACTTCTTTGTTTCTTTCGTATCTGATAAAGCTGTGAGTGGAAAACCAGACCTATTAAGTTTGATTTCGTGTGGAGCCTTTGCTTTAATGTCTCTGTGCCTGTCAAGGCAGATTGACCTTGGGTTTGAAGCAGATCTCCTCAATTTCTTCCTCGGATGTCTAACTGTTCAACTGATGAAGATCAATTTGATGCTCTCTATCTTTGCAGCCATATTCTGCTATTGTTTCCTAGTTCTTCGTTCCAAATTGGATTCTCAATCACAGATTGGAACTATAGGGAGAGAGGACCATGTAACCGTAGAAATTGATGTTGCAGAAGGAGGAGAAAGAGGAGCTGATGACAACAGAAGTGACTTCCAATCTAATCATAGCAATGGCCACCGGCAATTTCCGTCGCTAAGAAGAAGGGTGGGTGACGGGTACAATTGGAAAAAATATGAAGATAAAGTAGTGAAAGGGAATGAAAATCAGATAAGTTATTACAAGTGCACACACCCTAATTGCCCTGTGAAGAAAAAAGTTGAGAGAACTATAGATGGGGAATTTAACATGTCAAAAAGTTCAATGGCAAATGAATGA 783 0.3997 MESCGIYVECDWTDLLCVEFLFQPSIRRVELLEDHPLHFQQHDVIFEEMETFQEFFAESSCACSGFVAYFFVSFVSDKAVSGKPDLLSLISCGAFALMSLCLSRQIDLGFEADLLNFFLGCLTVQLMKINLMLSIFAAIFCYCFLVLRSKLDSQSQIGTIGREDHVTVEIDVAEGGERGADDNRSDFQSNHSNGHRQFPSLRRRVGDGYNWKKYEDKVVKGNENQISYYKCTHPNCPVKKKVERTIDGEFNMSKSSMANE 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11565g00003 260 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 206 247 IPR044810 GO:0003700
Mupr11565g00003 260 Pfam WRKY DNA -binding domain 207 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr11565g00003 260 ProSiteProfiles WRKY domain profile. 200 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr11565g00003 260 SMART WRKY_cls 205 254 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr11565g00003 260 MobiDBLite consensus disorder prediction 176 200 - -
Mupr11565g00003 260 Gene3D WRKY domain 198 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr11565g00003 260 SUPERFAMILY WRKY DNA-binding domain 204 248 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11565g00003 Mupr-Chr11565 16169 17082 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11565g00003 182 250 WRKY Transcription Factor Family AT2G38470 52.174 3.00e-16 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mupr11565g00003 WRKY 1.6e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11565g00003 - - ccaj:109792596 296.975