LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr11565g00002	ATGCTTTTGGAGCGTACGAGGGAATACTTCAAAGATGAATCTGAACTAGCTGGTATGGACCATAACTTTGTGATCGATGCGCTACCATTGGGAAAAATCAACGACCTTCACGAAACCATAAAGCTGATGGTGGGAGATGGGTTTGAAAAGGAGTGCTGCGACGTGTACTGTAATTGGCGGAGGGAAAGCTTAACGGAGTCCTTAATGAATTTGTTAGGGGTGCAAGGGGTCAACATCGTGGAGAAACGTGAACAGAGGGAATTTCAATATTACATTTTTAGATGGATGAAAGCTGTCAATGTCGCTCTTAGGATACTATTTCCCAGTGAACGACAACTCTGTGATCGCATCTTCATGGGCTTCTCTTCTGTTGCCGGTTTTTGTTTCACTGAGGTTTGTCGAGGAGCCACGATTCAGTTGCTGAATTTTGCTGAAGCGGTTGCGAGTGGGAGCCCTTCGGAGTGGCGTTTGTCCAAAACCCTTGACATGTTTGACACATTGCGTCGCCTAATTCCTGAGTTTCAATCATTGTTTCCGGAGTCACTGGTAAAGGAAGTTATGATAGTCCATGACAAATTAGGAGAGGCAAGCAGGGACATTTTCATGAACATGGAAAATGTTATTTTCCATATCCCAGAGGCCAAGGTAGTTGCTCCGCCAGATGGTCGGGTTCACCTAATGACCAAATATGTCATTCGCCACCTCGTTTTTGCTAGTCGGGCAAAACACATCTTGGAGCAAATTTTAGAACAATACCCCAAGTTTGCTAATGAAGTGGGAAAATCTTCTTCGGTTTCTGATCTCTGTGATCGAATAGTGAAGCAATTGGAGACAAAACTCGTGACAATGTCCAAAATCTACGAGAACCCTGCTTTACGTTACTTTTTCCTCATGAATAATTGGAGGTACATGGAGCTAGAGACAAGTAAGTTGATATTAGACCTTGATTGTTTCCAACAAGACACAACAAAAGTTCGACAAAACCTCCAACTTTATCAAAGTAGCTCTTGGAATATGGTGCTAGAGTTTTTGAAGCTAGAGAACAGTGAGTTAGTGGTGCCTAATGCTAATGCAGAGTCACTGAAAGGCAACCTCAATTTGTTCAACATGCACTTTAAGGATATATGTAGCACTCAATCTAGATGGTTTGCCTTTGATAAGCAGCTGAGTGAAGAAATAATTATATCACTACAAAACATCTTGTTGCCAGCATATGGGAACTTCATTGGGAGGTTCCACCATATTCATGGTAAACATGCTTCTGAGTATATTAAATATGGATTGTCTGATATTCGAGACCAACTCAACCATTTGTTTCTTGGAAGCACGCCAATGAATCAGTATCTGAAAGAGAAGGAAAGACTGCCTTTGTCCACTCAAATCAAGAGATGGCTGATGCAGGTAGCTGTATGGAGATTTGTTGGTTTTGTTTCTACTATTGTTGGACTACTCTGTTATGCACTCAGCTCCTCCTTCAACAATCTATTCGGAGACTGGAACTCGTTGAAGATCCTTCTTTATGAGGTATGTCAACACTCACCGAGTCTCCGATTCAAAGCTCATTCCGCGTTCTTGGTTTTGACCATCACATCCGTGTATTCCTATTTCGCGGACAAAGTTGTGAATGGAAAACCAGATGCATATAGCTTGATTTCGTGTGCTGCCTTTGCTATCATGTCATTCAGCCTGTCAAGGCAAACTCAGTGTGGATTTGAAATGGATTCTTTTTATTTTTTCTTGGGATGTCTAATAGTGCAACTCTTGAAGATTAATTTGGCATTAGCTATTGTTGGAATAGGTTTGAGCTATGGCCTTATTATTCTTCGTTCCTCCTTAGATACCACATCATACCAGAATCTTGGAGTTCAAGATGAGCATCCAGTTGTGATTCATATCAATTCGCTTACTGATAATGCTAGTTTGATGCAACAACTCATGGCTTGTATAAAGGCGCTTCAGCAGGGAAATTCGAAGCTCACCGACATGCTTTTTAAGCATGTGAAGGAAAGCCTCGATAAAATTGAACTAGCTGATGTGGACTATAACTTTGTGATCGATGCGCTACCATCGGGAAAAGTCAACGACCTTCACGAAACTATAAAGCTGATGATGGGAGTTGGGTTTGCAAAGGAGTGCTGCGACGTGTACTGTAATTGGCGGAGAGAAAGCTTTAAGGAGTGCTTAATGAATTTATTAGGATTGCCAGAGATCAACATCGAGGAGAAACTTGAAGGGGTGGGATTTAAAGATTACATTATTGTAAGACGGATTGAGGCTATCAAGGTCGCTCTTACGACACTATTTCCCAATGAGCGACGACTCTGTGATCGCGTCTTCGAGGGGTTCCCTTCTGTCGCTCGTCTTTGTTTCACTGATGTTTGTCGGGGAGCCACGATTCAATTGCTGAATATTGCCCATGTGTTTACGAGTGGGATCCCTTTGAACTGGCGTTTGTTCGAAATTCTTCGCGTGTTTGAGGCCTGGATTTACCTAATTCCTGAGTTTCAATTATTGTTTCCAGAGTCACTGGTAAATGAAGCAATGGCAATCCGCGACGATTTTGGAGAAGCAAACAGGGACGTTTTAATGAAAGTGATAAATATGACTTTCCTTTACCCAGAGAAGAGTGCAATGGCCTTCCGTCTCGGGCTTCATGTAATGACCATTGATGTCATGAGCTACCTCATTTCTTCTTGTTTAGCCCAACAGACCTCGGAGCATAAGGGAGCGGGAACATCTTCATTTTCTATGCAGATTGATCGAATAATGAAGCATTTGGACAGAAAATTAGTGGTTGAGTACAAAAACATGAACCCTGCAGCACGGTACTTTTTCATGATGAATAATTGGAGGTTCGTAGAGATAAGCTCACAACAGCCAGGGTTTGACCTTGATTGTTTCAAAAAATACAGAACAAAAGTTCGACAAAACCTCGAACTTTATCGAAGAAGCTCTTGGAATGTGGTGCTAGAGTTTTTGAAGCTAGAGAACAATGAGTTAGTGGAGCCTAACGCAGAGTCACTGAAAGACAACCTCGAGTCGTTCAACATGTGCTTTAACGATATATGCAGCACTCAATCAGGATGGCTTACCTTTGATGAGCAGCTAAGTAAAGAAATAATAATATCACTACACAACATCTTGTTGCCAGCATATGGAAACTTCATTGCGAGGTTCCAAGATATTCTTGGTAAACATGCTTATAAGTACATTAAATATGGAATGTTTGATATTCAAGACCATCTCAACCAATTGTTTATTGGAGAGATGCCAAAGACTCAGCGTCTGAAAGAGAACGAAAAACTGTTGATGCTTATTGGCATGGCTCAAGTCTCAAACTAA	3342	0.4156	MLLERTREYFKDESELAGMDHNFVIDALPLGKINDLHETIKLMVGDGFEKECCDVYCNWRRESLTESLMNLLGVQGVNIVEKREQREFQYYIFRWMKAVNVALRILFPSERQLCDRIFMGFSSVAGFCFTEVCRGATIQLLNFAEAVASGSPSEWRLSKTLDMFDTLRRLIPEFQSLFPESLVKEVMIVHDKLGEASRDIFMNMENVIFHIPEAKVVAPPDGRVHLMTKYVIRHLVFASRAKHILEQILEQYPKFANEVGKSSSVSDLCDRIVKQLETKLVTMSKIYENPALRYFFLMNNWRYMELETSKLILDLDCFQQDTTKVRQNLQLYQSSSWNMVLEFLKLENSELVVPNANAESLKGNLNLFNMHFKDICSTQSRWFAFDKQLSEEIIISLQNILLPAYGNFIGRFHHIHGKHASEYIKYGLSDIRDQLNHLFLGSTPMNQYLKEKERLPLSTQIKRWLMQVAVWRFVGFVSTIVGLLCYALSSSFNNLFGDWNSLKILLYEVCQHSPSLRFKAHSAFLVLTITSVYSYFADKVVNGKPDAYSLISCAAFAIMSFSLSRQTQCGFEMDSFYFFLGCLIVQLLKINLALAIVGIGLSYGLIILRSSLDTTSYQNLGVQDEHPVVIHINSLTDNASLMQQLMACIKALQQGNSKLTDMLFKHVKESLDKIELADVDYNFVIDALPSGKVNDLHETIKLMMGVGFAKECCDVYCNWRRESFKECLMNLLGLPEINIEEKLEGVGFKDYIIVRRIEAIKVALTTLFPNERRLCDRVFEGFPSVARLCFTDVCRGATIQLLNIAHVFTSGIPLNWRLFEILRVFEAWIYLIPEFQLLFPESLVNEAMAIRDDFGEANRDVLMKVINMTFLYPEKSAMAFRLGLHVMTIDVMSYLISSCLAQQTSEHKGAGTSSFSMQIDRIMKHLDRKLVVEYKNMNPAARYFFMMNNWRFVEISSQQPGFDLDCFKKYRTKVRQNLELYRRSSWNVVLEFLKLENNELVEPNAESLKDNLESFNMCFNDICSTQSGWLTFDEQLSKEIIISLHNILLPAYGNFIARFQDILGKHAYKYIKYGMFDIQDHLNQLFIGEMPKTQRLKENEKLLMLIGMAQVSN	1113

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr11565g00002	1113	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	19	440	IPR004140	GO:0000145\|GO:0006887
	Mupr11565g00002	1113	SUPERFAMILY	Cullin repeat-like	645	1086	IPR016159	-
	Mupr11565g00002	1113	SUPERFAMILY	Cullin repeat-like	17	439	IPR016159	-
	Mupr11565g00002	1113	Gene3D	Exocyst complex component Exo70	621	1095	-	-
	Mupr11565g00002	1113	Gene3D	Exocyst complex component Exo70	2	448	-	-
	Mupr11565g00002	1113	Pfam	Exo70 exocyst complex subunit	755	1084	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Mupr11565g00002	1113	Pfam	Exo70 exocyst complex subunit	94	436	IPR046364	GO:0000145\|GO:0005546\|GO:0006887

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr11565g00002	Mupr-Chr11565	8221	15818	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr11565g00002	20	443	EXO70 exocyst subunit family	AT5G58430	46.330	3.63e-110	355

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr11565g00002	-		-	gsj:114383642	848.58