Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11561g00006 ATGGCTGCACAGGCTCTTGTATCATCATCATCTCTCACCTTCTCAGCGGAGGCTGCGAAACAGAGTCTTGGAGCAAGATCACTCCAATCTCCTATTGGGTTCTCCAGAAAAACCTCCTTTATTGTTAAGGCAGCTGCTACTCCCCCTGTCAAGCAAGGATCCGACAGACCTTTGTGGTTTGCATCAAAGCAAAGTCTTTCTTACTTGGATGGCAGCCTTCCGGGAGACTATGGATTTGATCCTCTGGGACTATCAGACCCTGAGGGAACAGGAGGGTTCATTGAGCCGAAATGGCTAGCATATGGTGAGATCATCAACGGTCGTTATGCAATGTTGGGTGCAGTTGGTGCCATAGCACCTGAAATTCTTGGCAAGGCTGGTTTGATCCCTCAGGAAACAGCACTCCCATGGTTCAGAACCGGCGTGTTCCCACCTGCAGGAACATATAACTACTGGGCCGACTCGTACACACTCTTCGTGTTTGAGATGGCACTGATGGGCTTTGCGGAGCACAGAAGATTCCAAGATTGGGCCAAACCGGGTTCCATGGGCAAACAGTACTTCCTAGGACTAGAGAAAGGCCTGGGAGGCTCTGGTGAACCAGCTTACCCAGGAGGGCCTTTCTTTAACCCTCTTGGTTTTGGTAAGGATGAGAAGTCCTTGAAGGATTTGAAGCTGAAGGAAGTGAAGAATGGAAGGTTGGCTATGTTGGCTATCTTGGGTTACTTTGTTCAAGCTCTTGTCACAGGTGTTGGGCCATACCAAAACCTCCTAGACCATCTGGCTGATCCCGTGCACAACAACGTCTTGACCAGTCTCAAGTTCCATTGA 831 0.4958 MAAQALVSSSSLTFSAEAAKQSLGARSLQSPIGFSRKTSFIVKAAATPPVKQGSDRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETALPWFRTGVFPPAGTYNYWADSYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQALVTGVGPYQNLLDHLADPVHNNVLTSLKFH 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11561g00006 276 Gene3D Chlorophyll a/b binding protein domain 58 275 - -
Mupr11561g00006 276 FunFam Chlorophyll a-b binding protein, chloroplastic 57 275 - -
Mupr11561g00006 276 Pfam Chlorophyll A-B binding protein 67 246 IPR022796 -
Mupr11561g00006 276 SUPERFAMILY Chlorophyll a-b binding protein 55 272 - -
Mupr11561g00006 276 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 8 271 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11561g00006 Mupr-Chr11561 12503 13879 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11561g00006 1 276 Chloroplast and Mitochondria Gene Families AT1G61520 84.058 8.02e-165 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11561g00006 K08909 - gmx:100784090 528.094