Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11553g00002 ATGGCTTTCTCTCTTTTGTGTCCTCTTTTTGCCACCTTTCTTTTCACGCAAACTCTGGCAGATACTTCATGCACCGATTGTTTTGTTCAATCTCGTGCAGCATATTACCCAAACTCTGAAGAAAATGGCACAGACGTTGGTGCATGTGGATTTGGTTCCTTTGGGGCTACCGTTAATGGTGGGGACGTATCAGCTGCATCTAATCTTTATCGAAATGGTGTTGGCTGTGGCTCCTGTTACCAGGTGAGATGTAGCAATAGTGCTTATTGCTCAGACAACGGTGTCACCGTAGTTATAACTGACCAAGGCTCAAGTGATAACACTGACTTCATTCTTAGCCAACGAGCCTTTGGTGGGATGGCTCTGACCACTGACGCAGCTGATTCTCTATTAGCTCTTGGCGTAGTTGATATTGAATATAGACGCTACCCGAACAAAAATATTACAGTTAAGATAGATGAGAGCAGCAACAATCCTAACTATTTGGCTTTTGTTATATGGTTTCAACAAGGAAGCAGAGACATAACTGCTGTGCAACTTTGTGAGACTCAGAACTTTGTCTGCAAGTTACTGGATCGGAGTCATGGGGCAGTGTGGACCACTACTGCTCCACCAAGTGGACCTTTGAGTTTAAGGATGTTGTTTAGTGCTGAAGAAGAGGGAGAAGAAACATGGATCGTTCCCGTTAATAACATACCACAAGACTGGCAGGCTGGACAAACATACGACTTAGGGGTACAAGTGGATCAATAG 753 0.4422 MAFSLLCPLFATFLFTQTLADTSCTDCFVQSRAAYYPNSEENGTDVGACGFGSFGATVNGGDVSAASNLYRNGVGCGSCYQVRCSNSAYCSDNGVTVVITDQGSSDNTDFILSQRAFGGMALTTDAADSLLALGVVDIEYRRYPNKNITVKIDESSNNPNYLAFVIWFQQGSRDITAVQLCETQNFVCKLLDRSHGAVWTTTAPPSGPLSLRMLFSAEEEGEETWIVPVNNIPQDWQAGQTYDLGVQVDQ 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11553g00002 250 SUPERFAMILY PHL pollen allergen 146 243 IPR036749 -
Mupr11553g00002 250 CDD DPBB_EXLB_N 29 144 - -
Mupr11553g00002 250 PANTHER EXPANSIN-B3 15 247 - -
Mupr11553g00002 250 SUPERFAMILY Barwin-like endoglucanases 19 145 IPR036908 -
Mupr11553g00002 250 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 144 IPR007112 -
Mupr11553g00002 250 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 160 244 IPR007117 -
Mupr11553g00002 250 Gene3D - 144 248 IPR036749 -
Mupr11553g00002 250 Pfam Lytic transglycolase 66 140 IPR009009 -
Mupr11553g00002 250 Gene3D - 16 143 IPR036908 -
Mupr11553g00002 250 Pfam Expansin C-terminal domain 148 227 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11553g00002 Mupr-Chr11553 6550 8189 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11553g00002 9 243 Expansin Gene Family AT4G17030 41.909 1.76e-54 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11553g00002 - - gmx:100812555 439.499