Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11551g00003 ATGATGCATCGCTGTTGCGGAGGCTCCCAGGGGCACGTGATGGGCACGTGCACGTGTGCCATGTATCACACCGAAGCCAATGCCAACTCTTACTCCATGCTCTTTTCTATGCCCAACGCCCACGCTCCCTATGATGATTACGAACCCGACATGTATTCCTCCTTCACGCCCTCACCCTCTTCCGTCGACTGCACGCTCTCCCTCGGTACCCCCTCCACGCGTTTCACCGAAGACGAGGAGAAACGAAACCGCCACGAACGTCGCTCTTCCGTCTCCAATTTTTGCTGGGACATGCTCCAATCCAAACAATCTCAAACAAAATCCACCAGAGGAACCACTGGTAACAATGCCAACAACGACCCTCTCCTCGCTCGTCGCTGCGCCAACTGCGATACCACTTCCACTCCGCTTTGGAGGAACGGTCCTCGAGGCCCAAAGTCACTATGCAATGCCTGTGGGATCAGATTCAAGAAGGAGGAGAGAAGAGCGAGCGCTGCCGCAGCCACGTCAGCAGCGGTTCCCGGCGGCGTGATGGAATCGGCGCGCGCGTACGGGCACCACAGCAACTCGTGGTACGCGCAGTCGCAGAGCCAAAAGATGAGTAACGAGTTACGGTTCATGGAGGATTCCGATAGAGATTCGGAGAATGGCATTCCGTTCCTGTCTTGGAAACTGAACGTTGCGGACCGAACGAGCCTCGTTCACGACTTCACGAGATGA 720 0.5625 MMHRCCGGSQGHVMGTCTCAMYHTEANANSYSMLFSMPNAHAPYDDYEPDMYSSFTPSPSSVDCTLSLGTPSTRFTEDEEKRNRHERRSSVSNFCWDMLQSKQSQTKSTRGTTGNNANNDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRASAAAATSAAVPGGVMESARAYGHHSNSWYAQSQSQKMSNELRFMEDSDRDSENGIPFLSWKLNVADRTSLVHDFTR 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11551g00003 239 Gene3D - 123 203 IPR013088 GO:0006355|GO:0008270
Mupr11551g00003 239 ProSitePatterns GATA-type zinc finger domain. 127 152 IPR000679 GO:0006355|GO:0043565
Mupr11551g00003 239 CDD ZnF_GATA 126 158 IPR000679 GO:0006355|GO:0043565
Mupr11551g00003 239 PANTHER GATA TRANSCRIPTION FACTOR 18 11 239 IPR044272 GO:0003700|GO:0009908
Mupr11551g00003 239 ProSiteProfiles GATA-type zinc finger domain profile. 121 157 IPR000679 GO:0006355|GO:0043565
Mupr11551g00003 239 SMART GATA_3 121 174 IPR000679 GO:0006355|GO:0043565
Mupr11551g00003 239 MobiDBLite consensus disorder prediction 66 87 - -
Mupr11551g00003 239 Pfam GATA zinc finger 127 161 IPR000679 GO:0006355|GO:0043565
Mupr11551g00003 239 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 124 163 - -
Mupr11551g00003 239 MobiDBLite consensus disorder prediction 102 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11551g00003 Mupr-Chr11551 24139 25598 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11551g00003 18 239 C2C2-Gata Transcription Factor Family AT3G50870 43.554 1.15e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mupr11551g00003 GATA 5.7e-18 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11551g00003 - - gsj:114390318 328.561