Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11547g00006 ATGGATCCTATTACAGCACACGGGCATTCTCTTCCACCTCCTTTCCACCTGCAACAACACCACTTCCACACCTTACAACAACCCACCCAAGATGAGCAAAGCGGAAGCACTGCCGCTCACAAAAGGGAACGCGAAGAACAAAACAATAACAACACTGAAACCAACGAACCAGGTGCCGCCGAAACCGAAATCACCAGAAGACCTCGCGGAAGACCTGCCGGATCCAAGAACAAACCGAAGCCACCCATTATCATCACTCGCGACAGCGCCAACGCCATGAGAACCCACATGATGGAGGTGGCAGACGGGTGCGACATCGTGGAAAGCGTCTCCGAATTCGCCAGGAAGCGCCAGAGAGGGGTTTGCATCATGAGCGGCACCGGCACGGTTACCAACGTCACTCTCAGGCAACCGGCTTCTTCCGGTGCCGTTGTCACTCTCCACGGAAGGTTCGAGATCTTGTCCCTCTCTGGCTCCTTCCTTCCGCCGCCGGCTCCACCGGCTGCTTCCGGTTTGACCATTTATTTGGCCGGTGGTCAGGGACAGGTGGTGGGAGGAAGTGTGGTTGGAACGCTGGTTGCTTCGGGGCCTGTGGTCATCATGTCTGCTTCGTTTAGCAACGCTGCGTACGAGAGACTTCCATTGGAAGATGAGGAGTCTAACTCGATGGCTCTTCAAGGAGGTTCCATTGGCTCACCACCCGGCGGTGCTCAACCGCAGCTTCTTGGGGATTCCACTGCTCCTCTCTTTCACGCTTTGAATCCCAACCTTCTCAATTCTGTTCAGATGCCTTCCGATTCCTTCTGGCCAACTTCTCGCTCTCCTTACTGA 831 0.5523 MDPITAHGHSLPPPFHLQQHHFHTLQQPTQDEQSGSTAAHKREREEQNNNNTETNEPGAAETEITRRPRGRPAGSKNKPKPPIIITRDSANAMRTHMMEVADGCDIVESVSEFARKRQRGVCIMSGTGTVTNVTLRQPASSGAVVTLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGTLVASGPVVIMSASFSNAAYERLPLEDEESNSMALQGGSIGSPPGGAQPQLLGDSTAPLFHALNPNLLNSVQMPSDSFWPTSRSPY 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11547g00006 276 Gene3D - 93 227 - -
Mupr11547g00006 276 MobiDBLite consensus disorder prediction 218 244 - -
Mupr11547g00006 276 MobiDBLite consensus disorder prediction 1 84 - -
Mupr11547g00006 276 SUPERFAMILY AF0104/ALDC/Ptd012-like 90 221 - -
Mupr11547g00006 276 FunFam AT-hook motif nuclear-localized protein 93 220 - -
Mupr11547g00006 276 ProSiteProfiles PPC domain profile profile. 90 228 IPR005175 -
Mupr11547g00006 276 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 33 230 IPR014476 GO:0003680
Mupr11547g00006 276 Pfam Plants and Prokaryotes Conserved (PCC) domain 94 207 IPR005175 -
Mupr11547g00006 276 MobiDBLite consensus disorder prediction 36 50 - -
Mupr11547g00006 276 CDD DUF296 94 161 IPR005175 -
Mupr11547g00006 276 PIRSF ESCAROLA 13 268 IPR014476 GO:0003680
Mupr11547g00006 276 MobiDBLite consensus disorder prediction 20 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11547g00006 Mupr-Chr11547 51885 52715 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11547g00006 1 276 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 53.086 8.24e-81 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11547g00006 - - gmx:100795257 388.267