Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11546g00001 ATGCTGGGGGACTCAGCAGTGTTGGGGACAGGAGGAGGAGGCTCTGGAGATGCAGTGGCAGCAGCTGCCGCTGCATCAGGAGGAGCTCACGACGGTGCTGACGGCGGCGGCGGCGGCGGAGGATCAAATTCAGGGGACGATGAAAGGGGTAGAGTTGAGGAAGGTGACAGGAGCTTCGGCGGGAACAGGTGGCCTAGGCAAGAGACTCTGGCTTTGTTGAAGATACGGTCGGATATGGACGTGGCTTTTAGAGATGCAAGTGTAAAGGGTCCCTTGTGGGATGAGGTTTCTAGGAAGCTGGCAGAGCTTGGCTACCACAGAAATGCCAAGAAGTGCAAAGAGAAATTCGAGAACGTTTACAAGTACCACAAGAGAACCAAGGAAGGGCGAAGTGGGAAATCAGAAGGCAAAACTTATCGCTTCTTTGATCAATTACAAGCCCTTGAGAACAACCCTTCTATCCAATCCCCAACATCAAAGCCACCACAAACAACAGCACTACCAGCAACACCAGTGTCAATGGTGGTAACAACCACACACTCATCAATAATGCCACTTGTTCCCCCAACCACAACAGTGCCATTGCTTCCAGTGTCTAATAACACCACTGTTCCATCAACAACTACACTCCCTATGCCTCAAGGCATTCTCAACATAACACCACCCTCAACACTAAACATCACAACCCCTTCCTACCCTTCATCAAACCCTACATATTTCCCAACACAAACACCAAACCCTACTAGTAACAACAACAACAACAACCCTCCAAACACCATCACCCCACCCTCGTTCCCCAACATCCCCACCGACCTCTTGTCGAATTCGAGTTCTTCCTCGACTTCCTCGGAGGGAACAATGGAGGGAGGGGGAACGAGGCGCAAGAGGAAGAGGAAGTGGAAGGACTTCTTCGAGAGGCTCATGAAGGAAGTGATCGAGAAGCAGGAGGAGCTGCAAAGGAGGTTCTTAGAGGCCATAGAGAAAAGAGAGCAAGAACGAGTGGTGAGAGAAGAAGCATGGAGAACGCAAGAGATGCTAAGGATCAACAGGGAAAGGGAGATTCTAGCACAAGAGAGGTCCATTGCTGCAGCAAAAGACGCAGCTGTTATGGCATTTTTGCAAAAGATAGCCGAACATCAACAACAAGAAATCAATCTTGAGCCAGCATTGAATAACAGCAACAACAACAACGCTATTGTTCCACCAGTGGCACAAGCAACTACAGCACCAACACCAGCACCAGCACCGCAACAAACACAAGCAACAACAGTTCCTGAGACCCCACAAGCCCAGCCCTTGGTCCCACAAGCACAACCACTGCAACAGCAACATCAGTTGCAGCAGCAACAACAGGTGGTGACTAATGTAGAAATCAATAAAGCTGATGATAATAACGGTGAGAATTTGATGATGGGAGGAGCGAGCTCTTCAAGGTGGCCAAAAGTGGAGGTACAAGCACTGATAAATCTGAGGACAAGCCTGGAAAAGAAGTACCAGGAAAGTGGACCAAAAGGACCACTGTGGGAGGAGATCTCAGCGTTGATGAAGAAAATGGGGTACAACCGGAATTCCAAAAGGTGCAAGGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAAGTCAAGGAAAGTAACAAGAAGAGGCCTGAAGATTCCAAGACCTGTCCCTATTTTCACCAGTTGGAGGCTCTATATAGGGAGAAGAACAAGGTAGAGAACCAGATGAAGCCGGAGAGCATGATGGCGCCGCTCATGGTGCAGCCGGAGCAACAATGGCCTCCCCAACACGTCGTGGTGCCACCAGAAGTAACCATGGGAGACGCCTCGAATGACCCCATGGACCGGCAGCACCACGAGGAGGACGACGACGAGGAGGATGATAAGGAAATTATGGATGAAGATGAGGATGATGACGATGACGGAGGTGGTAATTATGAGATAGTAGCAAGCAAGCCAGCTTCAGCAGAGTGA 1971 0.4977 MLGDSAVLGTGGGGSGDAVAAAAAASGGAHDGADGGGGGGGSNSGDDERGRVEEGDRSFGGNRWPRQETLALLKIRSDMDVAFRDASVKGPLWDEVSRKLAELGYHRNAKKCKEKFENVYKYHKRTKEGRSGKSEGKTYRFFDQLQALENNPSIQSPTSKPPQTTALPATPVSMVVTTTHSSIMPLVPPTTTVPLLPVSNNTTVPSTTTLPMPQGILNITPPSTLNITTPSYPSSNPTYFPTQTPNPTSNNNNNNPPNTITPPSFPNIPTDLLSNSSSSSTSSEGTMEGGGTRRKRKRKWKDFFERLMKEVIEKQEELQRRFLEAIEKREQERVVREEAWRTQEMLRINREREILAQERSIAAAKDAAVMAFLQKIAEHQQQEINLEPALNNSNNNNAIVPPVAQATTAPTPAPAPQQTQATTVPETPQAQPLVPQAQPLQQQHQLQQQQQVVTNVEINKADDNNGENLMMGGASSSRWPKVEVQALINLRTSLEKKYQESGPKGPLWEEISALMKKMGYNRNSKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLEALYREKNKVENQMKPESMMAPLMVQPEQQWPPQHVVVPPEVTMGDASNDPMDRQHHEEDDDEEDDKEIMDEDEDDDDDGGGNYEIVASKPASAE 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11546g00001 656 MobiDBLite consensus disorder prediction 265 288 - -
Mupr11546g00001 656 SMART sant 60 122 IPR001005 -
Mupr11546g00001 656 SMART sant 475 537 IPR001005 -
Mupr11546g00001 656 MobiDBLite consensus disorder prediction 618 643 - -
Mupr11546g00001 656 ProSiteProfiles Myb-like domain profile. 477 535 IPR001005 -
Mupr11546g00001 656 PANTHER FI21293P1 35 615 - -
Mupr11546g00001 656 MobiDBLite consensus disorder prediction 591 656 - -
Mupr11546g00001 656 Gene3D - 64 125 - -
Mupr11546g00001 656 Gene3D - 479 540 - -
Mupr11546g00001 656 Coils Coil 301 332 - -
Mupr11546g00001 656 Pfam Myb/SANT-like DNA-binding domain 62 148 IPR044822 -
Mupr11546g00001 656 Pfam Myb/SANT-like DNA-binding domain 477 564 IPR044822 -
Mupr11546g00001 656 ProSiteProfiles Myb-like domain profile. 62 120 IPR001005 -
Mupr11546g00001 656 MobiDBLite consensus disorder prediction 1 63 - -
Mupr11546g00001 656 FunFam Trihelix transcription factor GT-2 479 540 - -
Mupr11546g00001 656 CDD GT1 62 127 - -
Mupr11546g00001 656 MobiDBLite consensus disorder prediction 230 297 - -
Mupr11546g00001 656 MobiDBLite consensus disorder prediction 46 61 - -
Mupr11546g00001 656 MobiDBLite consensus disorder prediction 230 258 - -
Mupr11546g00001 656 CDD GT1 477 542 - -
Mupr11546g00001 656 FunFam Trihelix transcription factor GT-2 64 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11546g00001 Mupr-Chr11546 14897 17706 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11546g00001 60 591 Trihelix Transcription Factor Family AT1G76890 46.266 2.77e-140 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mupr11546g00001 Myb_DNA-bind_4 2.2e-20 CL0123