Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11542g00004 ATGTATGTATGTACCTACCAAAATGACGTTGTTGCATGGCTTGTGGGTTTGGAGGGAGAACCTTTTTATGAGAGGCGAGTGAGCCACGTGGTGGGATCCAGATCTAGAAGATCTTGTTGCATCGAGCTTGCAAATGGAGGTTTGGTTCTTGTCGGTGAAGCTCTGAAGGATAGTCCAATGAAAAATAATGTTGGGAAAAGAGGTTTGGCAAAACAAAATCATATGTTTTTTAACAAAAAGAGTCTCAATAACGAAGTAGTTAATGGAGGGGTAGGCTCTGGATCATCAACTGAAGATGACACAAGATTTAACAAGAGAACTAAAGATGGAAATAATGGGTTGAAGGGTTTGATTCAAATCCACGGGGGCTTGCAGATTTCGCAACAACCACCTCAAGGGTCAATCATATGTTGGGAGAGATTTCTCCATGTGAGATCAATAAAAGTTTTGTTGGTGGAAGATGATGATTCAACACGCCATGTTGTTTACGAAGTCAGCGCTGTTTCCAGTGGTCTTCAAGCGTGGAAAATCCTAGAAGATCCAGGAAATCACATTGATCTTGTCCTAACAGAGGTAGCTATGCCTATTTTGTCTGGAATAGGTCTTTTGTGCAAGATCATGAGCCACAAAACTTTGAAGAATATCCCTGTGATTATGATGTCGTCTCATGATTCTATGGGTATAGTCTTTAAGTGTTTGTCAAAAGGTGCAGTTGATTTTTTAGTGAAACCTATTCGGAGGAATGAACTTAAAAACCTTTGGCAGCACGTTTGGAGAAGATGCCACAGTAATGGCGACTCTGATTCGAATAGAGCCGGTCTTGGATGGAGTGAACTCATACTCGGTCTCAAACAGAGATGGATTTGCCTAGACAGAGATGACCCGGACAGAGTCAAACTAGAACAAAGTCGGACTCGACTCGAACTCGGC 930 0.4204 MYVCTYQNDVVAWLVGLEGEPFYERRVSHVVGSRSRRSCCIELANGGLVLVGEALKDSPMKNNVGKRGLAKQNHMFFNKKSLNNEVVNGGVGSGSSTEDDTRFNKRTKDGNNGLKGLIQIHGGLQISQQPPQGSIICWERFLHVRSIKVLLVEDDDSTRHVVYEVSAVSSGLQAWKILEDPGNHIDLVLTEVAMPILSGIGLLCKIMSHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELKNLWQHVWRRCHSNGDSDSNRAGLGWSELILGLKQRWICLDRDDPDRVKLEQSRTRLELG 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11542g00004 310 ProSiteProfiles Response regulatory domain profile. 134 258 IPR001789 GO:0000160
Mupr11542g00004 310 PANTHER TWO-COMPONENT RESPONSE REGULATOR 148 269 IPR045279 GO:0009736
Mupr11542g00004 310 SUPERFAMILY CheY-like 145 264 IPR011006 -
Mupr11542g00004 310 Pfam Response regulator receiver domain 163 252 IPR001789 GO:0000160
Mupr11542g00004 310 SMART REC_2 147 254 IPR001789 GO:0000160
Mupr11542g00004 310 Gene3D - 146 292 - -
Mupr11542g00004 310 MobiDBLite consensus disorder prediction 88 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11542g00004 Mupr-Chr11542 42177 47968 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11542g00004 75 262 Response Regulator Gene Family AT5G60100 60.714 1.56e-69 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr11542g00004 Response_reg 1.5e-16 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11542g00004 K12129 - gmx:100785796 352.829