Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mupr11528g00002 | ATGGAAGGCTCTGTCCCTGAACGTCTTGATTTTGGGAAGATGGGATACGGGTGCAAGCATTACAGGAGAAGGTGCAGGATTAGAGCTCCATGTTGCAATGAGGTTTACTTTTGCCGTCATTGTCATAACGAGGCAACGAGCATGCTGAGCAACCCTTTTGATCGGCACGAACTCATTCGCCATGATGTTCGACGTGTTGTTTGTTCAGTTTGTGACACGGAGCAGCCGGTTGCTCAAGTTTGCACAAATTGTGGTGTCAGAATGGGAGAATATTACTGCGACATATGCAAATTCTTCGATGATGATACCGGGAAACAACAGTTTCATTGTGATGATTGTGGAATTTGCAGAGTTGGTGGTCGTGAGAATTTTTTCCACTGCAATAAGTGCGGGTCTTGCTATTCGACTGGTCTGCGTGATAATCATTTGTGTGTGGAGAACTCCATGAGGCATCATTGTCCTATTTGTTATGAGTACCTTTTTGACTCATTGAAAGACACTGCTGTTATGAAATGTGGTCACACAATGCATTGTGAATGTTACGAAGAGATGATAAAGCGTGACAAGTATTGTTGTCCCATATGCTCCAAGTCGGTGATTGACATGTCTAGGGCATGGAAGAGAATTGATGAAGAGATTGAAGCAACTGTCATGCCTGATGATTACCGGTACAGAAAGGTTTGGATACTCTGCAATGACTGCAATGACACAACTGAAGTTTACTTTCACATTATTGGGCACAAATGTGGTCACTGCAGTTCATATAATACTCGTGCTATAGCTCCTCCTGTTCTTCCTCAATGA | 804 | 0.4328 | MEGSVPERLDFGKMGYGCKHYRRRCRIRAPCCNEVYFCRHCHNEATSMLSNPFDRHELIRHDVRRVVCSVCDTEQPVAQVCTNCGVRMGEYYCDICKFFDDDTGKQQFHCDDCGICRVGGRENFFHCNKCGSCYSTGLRDNHLCVENSMRHHCPICYEYLFDSLKDTAVMKCGHTMHCECYEEMIKRDKYCCPICSKSVIDMSRAWKRIDEEIEATVMPDDYRYRKVWILCNDCNDTTEVYFHIIGHKCGHCSSYNTRAIAPPVLPQ | 267 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mupr11528g00002 | 267 | FunFam | RING finger and CHY zinc finger domain-containing protein 1 | 224 | 266 | - | - | |
Mupr11528g00002 | 267 | SUPERFAMILY | CHY zinc finger-like | 15 | 87 | IPR037274 | GO:0008270 | |
Mupr11528g00002 | 267 | SUPERFAMILY | Zinc hairpin stack | 89 | 146 | IPR037275 | - | |
Mupr11528g00002 | 267 | SUPERFAMILY | RING/U-box | 152 | 201 | - | - | |
Mupr11528g00002 | 267 | Pfam | CHY zinc finger | 18 | 98 | IPR008913 | GO:0008270 | |
Mupr11528g00002 | 267 | ProSiteProfiles | Zinc finger CTCHY-type profile. | 88 | 152 | IPR017921 | - | |
Mupr11528g00002 | 267 | Pfam | Zinc finger, C3HC4 type (RING finger) | 153 | 195 | IPR018957 | GO:0046872 | |
Mupr11528g00002 | 267 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 140 | 225 | IPR013083 | - | |
Mupr11528g00002 | 267 | Gene3D | - | 226 | 262 | - | - | |
Mupr11528g00002 | 267 | PANTHER | RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 | 13 | 263 | - | - | |
Mupr11528g00002 | 267 | Pfam | Zinc-ribbon | 200 | 258 | IPR039512 | - | |
Mupr11528g00002 | 267 | ProSiteProfiles | Zinc finger CHY-type profile. | 11 | 86 | IPR008913 | GO:0008270 | |
Mupr11528g00002 | 267 | ProSiteProfiles | Zinc finger RING-type profile. | 153 | 196 | IPR001841 | - | |
Mupr11528g00002 | 267 | SMART | ring_2 | 153 | 195 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mupr11528g00002 | Mupr-Chr11528 | 6458 | 9340 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mupr11528g00002 | 3 | 266 | C2H2 Transcription Factor Family | AT3G18290 | 39.405 | 2.53e-54 | 187 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mupr11528g00002 | K10144 | - | gmx:100812246 | 570.466 |