Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11527g00001 ATGGCTGCGCCCCTAGGCTGTAGGCTTCAAAGCATGTTGCAGGCTGCGGTGCAATCTGTTCACTGGACTTATAGCCTCTTCTGGCAACTTTGTCCTCAACAAGTGATTCTGGTTTGGGGTGATGGCTACTACAACGGAGCAATTAAGACTCGGAAGACGGTGCAACCAATGGAGGTGAGTGCTGAGGAGGCGTCTCTACAAAGAAGCCAGCAACTTAGAGAACTCTATGAATCGTTGTCTGCCGGAGAGACAAACCCGCCCACTCGCCGGCCTTGTGCCGCCTTGTCGCCGGAGGACCTAACAGAATCTGAATGGTTCTATTTGATGTGTGTCTCATTCTCCTTTCCTCCTGGTGTTGGGTTGCCTGGAAAGGCATATGCTAGGAGGCAGCATGTATGGCTCACTGGAGCAAACGAAGCGGACAGCAAAACATTTTCGAGAGCCATTCTAGCCAAGACCGTGGTGTGCATTCCTTTATTAGACGGCGTCGTGGAGTTTGGCACAACGGATAAGGTTCAAGAAGATCTTAACTTTATCCAACACGTGAAGAGCTTCTTCATAGACCAGCTCAACACTCTGCCGCCGAAGCCCGCCCTGTCGGAGCATTCCACCTCCAACCCCACCTCCTCCTCCGATCACATCCCCGCCGTCATGTACACCGTGGCAGACCCACCCGCCGCCAATCCCAGCCAGAACGACGACATGGACGAAGAGGAAGAGGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAAGAGGAAGAGGAGGAGTCCGGCTCCGACGAGGAAACAGGAGGCCGCATAGGGCGGCGAGGTTCAACACCGAACATGGCGGCGGAGGCAAGCGAGCTGATGCAGCTGGAGATGCCGGAGGAGATCCGGGTGGGATCGCCGAACGACGGGTCCAACAACCTGGACTCGGACTTTCATTTGCTAGCGGTGAGTCAAGGAGGGAACGCGGCGGGTCAGGCTGAGTCAACTCGGAGGTGGGGCACGAGTCAAGACGCGCTACAAGTTCAACTACCGGCCTCAGCCCTTCATCCACTAGAAGACCTGACACAAGAGGACACACACTACTCTCAAACGGTATCCAATATCCTACAAAACCAGTCGAACCGGTGGCCAGCCTCACCCACCTCGGTTGGCTACATTGCATGCTCCACGCAATCAGCTTTCTCGAGGTGGAGCACCCGCGCCAACCACCACTTCCTCCCGGCGGTGGACGGCAGCAACCAGTGGCTCCTCAAATACATTCTCTTCACAGTCCCATACCTCCACGCCAAGAACCCCGGCGAGACTTCCCCCCAAACCGCCCCGGACCCGAAGCTGCGCGGCAAGGGAACGCCGCAAGACGAGCTCAGCGCCAACCACGTGCTGGCTGAGCGCCGCCGCCGCGAGAAGCTGAACGAGCGGTTCATAATCCTGCGGTCGCTTGTCCCTTTCGTGACCAAAATGGACAAGGCGTCCATATTGGGCGACACCATCGAGTACGTCAAGCAGTTGCGCCGGAAGATCCAGGAGCTGGAGGCCCGTAACCACCGGACAGAGGCGGAACAGCGTTCAAAGGTCCTAGAGGTAACGGTTCAGAGGACGAATAGCGGTTCGAGCAAGGAGCAACAACGGAGTGGGGTGACGACGATGGAGAAGAGGAAGGTGAGGATTGTGGAAGGAGTGGCGGCGAAGGCGAAGGCTAAGGCGGTGGAGGTTGTGGCGGCAGCGACGTCGGTGCAAGTTTCGATCATCGAGAGCGACGCGCTGTTGGAGCTTGAGTGTCCGCACAGGGAAGGGTTGCTTCTGGACGTGATGCAGATGCTGAGAGAGGTGAGGATTGAGATTATAGGGGTGCAGTCATCGCTTAACAATGGCGTCTTCGCGGCGGAATTGAGAGCTAAGGTCAATGATCACGCCAATGGGAAGAAGGTCAGCATTGTGGAAGTGAAGAGGGCACTTAACCAAATCATACCCCACGCTGTTGACTAG 1998 0.5676 MAAPLGCRLQSMLQAAVQSVHWTYSLFWQLCPQQVILVWGDGYYNGAIKTRKTVQPMEVSAEEASLQRSQQLRELYESLSAGETNPPTRRPCAALSPEDLTESEWFYLMCVSFSFPPGVGLPGKAYARRQHVWLTGANEADSKTFSRAILAKTVVCIPLLDGVVEFGTTDKVQEDLNFIQHVKSFFIDQLNTLPPKPALSEHSTSNPTSSSDHIPAVMYTVADPPAANPSQNDDMDEEEEEEEEEEEEEEEEEEEEEEEEEEESGSDEETGGRIGRRGSTPNMAAEASELMQLEMPEEIRVGSPNDGSNNLDSDFHLLAVSQGGNAAGQAESTRRWGTSQDALQVQLPASALHPLEDLTQEDTHYSQTVSNILQNQSNRWPASPTSVGYIACSTQSAFSRWSTRANHHFLPAVDGSNQWLLKYILFTVPYLHAKNPGETSPQTAPDPKLRGKGTPQDELSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRKIQELEARNHRTEAEQRSKVLEVTVQRTNSGSSKEQQRSGVTTMEKRKVRIVEGVAAKAKAKAVEVVAAATSVQVSIIESDALLELECPHREGLLLDVMQMLREVRIEIIGVQSSLNNGVFAAELRAKVNDHANGKKVSIVEVKRALNQIIPHAVD 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11527g00001 665 Coils Coil 228 269 - -
Mupr11527g00001 665 MobiDBLite consensus disorder prediction 232 267 - -
Mupr11527g00001 665 MobiDBLite consensus disorder prediction 434 459 - -
Mupr11527g00001 665 MobiDBLite consensus disorder prediction 222 281 - -
Mupr11527g00001 665 CDD bHLH_AtTT8_like 458 529 - -
Mupr11527g00001 665 Pfam Helix-loop-helix DNA-binding domain 461 508 IPR011598 GO:0046983
Mupr11527g00001 665 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 460 527 IPR036638 GO:0046983
Mupr11527g00001 665 Coils Coil 497 524 - -
Mupr11527g00001 665 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 186 IPR025610 -
Mupr11527g00001 665 PANTHER TRANSCRIPTION FACTOR TT8 8 661 - -
Mupr11527g00001 665 Gene3D - 459 531 IPR036638 GO:0046983
Mupr11527g00001 665 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 458 507 IPR011598 GO:0046983
Mupr11527g00001 665 SMART finulus 464 513 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11527g00001 Mupr-Chr11527 5823 17347 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11527g00001 300 662 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 37.197 1.16e-57 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr11527g00001 bHLH-MYC_N 2e-48 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11527g00001 - - gmx:100807157 1021.54