Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11499g00001 ATGGCTGCCCTCATCGATCTCAACACCTCCACCGATGACGATGATACGCCCTCCTCCCCCGTCTGCCTCGAGCTCTGGCACGCTTGCGCCGGCCCCATGATCTCCCTGCCTAAGAAAGGAACCACCGTCGTCTACTTCCCCCAAGGACACTTTGAACACCTTCGCGATTTTCCTCTACCCTCCTCTGTCAACATCCCCTCCCATGTTTTCTGTCGCGTGCTCGACGTCAAGCTTCATGTCAGTCTTCCTCTTCTCTTTTCACCCTACAAATTTAAAATGCTGTCTGCTTTTGTTCTTGTTTGGTTCCTTCCATCGAATGCTGAGGAAGGGAGTGATGAAGTGTATTGCCAGGTGTTGTTGGTTCCTGAAAGTGAGCAAGTGCAGCAGAAGTTGAGGGAAGGGGAAATTGATGCTGATGGCGAAGAGGAGGATGCTGAAGCTGTGATGAAATCCACCACGCCTCACATGTTCTGCAAGACTCTCACTGCTTCCGATACTAGCACTCATGGTGGATTCTCCGTGCCTCGTCGCGCCGCCGAAGATTGCTTTCCTCCGCTGGATTACAGTCAACAGAGACCTTCACAGGAGCTTGTGGCGAAGGATCTGCATGGTCAGGAATGGAGGTTTCGACATATTTACAGGGGGCAGCCACGAAGACACTTGCTTACTACTGGATGGAGTGCATTTGTGAACAAGAAGAAACTTGTGTCTGGAGATGCTGTTCTGTTTCTTAGGGGTGAGGATGGAGAACTGAGATTGGGAATTCGTAGGGCTGCTCAATTGAAAAGTGGCAGTAGCTTTTCAGCTCTTTCAGGCCAGCAATTGAATCTTAGCAGTCTTGTGGATGTGATTAATGCTTTATCCACTAGATGTGCCTTTAGCATTCATTACAATCCGAGGGTCAGCTCATCTGAGTTCATCGTACCTATCCACAAATTCTTAAAAAGCCTTGATTATTCTTATTCAGTTGGAATGAGGTTCAGGATGCGTTTTGAAACTGAAGATGCTGCGGAGCGAAGATTCACAGGATTAATTGTTGGAATTACTGATGTGGATCCTGTTAGATGGCCTGGATCAAAATGGAGATGCCTAATGGTAAGGTGGGATGACTTAGAAGCCACAAGGCATAATAGGGTTTCACCATGGGAGATTGAGCCATCTACTTCTGCTTCAACTGCAAATAACTTGATGTCAGCTGGTTTGAAGAGGACCAAGATTGGATTGCCTTCAGCCAAGCTAGAATTTTCAGTTCCCAATTCGATTGGAACATCAGACTTTGGGGAATCACTAAGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATTTTGGGTGTTAACACTACTTTTGATGGTATTAATGCTCAGAGTCACCAGCTACCTGAGTTTAGGAGGTGCTATCCTGGCTCAAACTATCCTAGGATTGCTGCAACAGGAAATAGCATTGGAATCCCACAAATGAGTTCCAATGTTACCTGCAATGGCATAGGCTTTAGTGAATCTTTCAGATTCCAGAAGGTCTTGCAAGGTCAAGAAATACTTCCAAGCCAACCATATGGAAGGTCCCTGTCTGTTGATGAGGCTTGTGGAAATGGTCACTTTGGACTGTTCGAAGGGTACCAGGCACCGAGATCCAGAAACGGATGGTCTTCACATTTGCATCCACCTGTTTCATCTGGGCTAGTTTCATCTCCATCGTCTGTGTTAATGTTCCAGCAAGCAGTCAATCCAGTTTCAAACTCGGATTATAACAACAAATTTAATCAGGCAATGGAAGGTAAATTCCATCGAGGTTCATACACAACTGAAGTGAAAGGTGGAAAATTTGTATCAACCCCCTATGAGCCTCTTCTCCGCGGACTAGCTCAGGAAGGCACAAATTCTTTTGGTCTTCCAAACTTTCATAATCAATTGGATAGTTCACGTTCACAGAATTCCATTTCGGTACTGAGAGCTAGTCAAGAGTTGGTTCCCTCGTGTAAAAGTAGATGCAGAGTCTTCGGTTTTTCATTAACTGAGGGTGCTCCCGTTGCAAATAAAGAGGCTGCTGACCCATCTGTAGTCACATGTTCTGGACCTTCCTTTACAAGACATGTTGAAGATGATTTCCATCCAGGGCATTCACTTAGGAGCAAGGCAGTGGGAAGTTATTGCACCAAAGTAAGCAGTCTTTATCCTCTAAGACACATG 2184 0.4588 MAALIDLNTSTDDDDTPSSPVCLELWHACAGPMISLPKKGTTVVYFPQGHFEHLRDFPLPSSVNIPSHVFCRVLDVKLHVSLPLLFSPYKFKMLSAFVLVWFLPSNAEEGSDEVYCQVLLVPESEQVQQKLREGEIDADGEEEDAEAVMKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKSGSSFSALSGQQLNLSSLVDVINALSTRCAFSIHYNPRVSSSEFIVPIHKFLKSLDYSYSVGMRFRMRFETEDAAERRFTGLIVGITDVDPVRWPGSKWRCLMVRWDDLEATRHNRVSPWEIEPSTSASTANNLMSAGLKRTKIGLPSAKLEFSVPNSIGTSDFGESLRFQKVLQGQEILGVNTTFDGINAQSHQLPEFRRCYPGSNYPRIAATGNSIGIPQMSSNVTCNGIGFSESFRFQKVLQGQEILPSQPYGRSLSVDEACGNGHFGLFEGYQAPRSRNGWSSHLHPPVSSGLVSSPSSVLMFQQAVNPVSNSDYNNKFNQAMEGKFHRGSYTTEVKGGKFVSTPYEPLLRGLAQEGTNSFGLPNFHNQLDSSRSQNSISVLRASQELVPSCKSRCRVFGFSLTEGAPVANKEAADPSVVTCSGPSFTRHVEDDFHPGHSLRSKAVGSYCTKVSSLYPLRHM 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11499g00001 728 FunFam Auxin response factor 320 391 - -
Mupr11499g00001 728 CDD B3_DNA 155 257 IPR003340 GO:0003677
Mupr11499g00001 728 Gene3D - 320 394 - -
Mupr11499g00001 728 Pfam Auxin response factor 284 364 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mupr11499g00001 728 SUPERFAMILY DNA-binding pseudobarrel domain 150 266 IPR015300 -
Mupr11499g00001 728 Gene3D - 155 259 IPR015300 -
Mupr11499g00001 728 ProSiteProfiles B3 DNA-binding domain profile. 157 259 IPR003340 GO:0003677
Mupr11499g00001 728 SMART B3_2 157 259 IPR003340 GO:0003677
Mupr11499g00001 728 FunFam Auxin response factor 155 259 - -
Mupr11499g00001 728 Pfam B3 DNA binding domain 157 258 IPR003340 GO:0003677
Mupr11499g00001 728 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 21 675 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11499g00001 Mupr-Chr11499 17396 22402 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11499g00001 156 514 B3 DNA Binding Superfamily AT2G33860 58.564 7.79e-142 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mupr11499g00001 B3 9.1e-23 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11499g00001 K14486 - gmx:100808119 1202.19