Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11496g00001 ATGAGTGGTTCTCCAAATCCAAATCCAAATTCAAATCCAAATCCAAAGCCACAGAGAACGTGCGACTATTGTGGGGACTTCACTGCTCTTCTATACTGCAGAGCCGATTCTGCTAAGCTCTGTTTGTTCTGTGACCGCAAAGTTCACTTTCCCAACCAGCTTTTCTCCAAGCACACTCGTTCTCAGCTCTGTGATGTGTGTGCCGATTCCCCTGCCTCCCTTCTCTGTTCTACTCACAACTCTGTTCTGTGCCAAAACTGTGACTGCCAAACCCACAACCACGCCCTGTCTCCGCCGCACCAACGGACTCCCCTCCACGGCTTCTCTGGTTGCCCTTCCGTCCCTCACTTGTTAACAATTCTCGGTCTCTCTGAAAAATCTCTGCTTCCAACCTCCCAGATTCAACCCCTTTCCGATTTCCACGTCTGGAATGCTCCTGCTTCTGTTGGTCTTCAAGATTTTATCGCTTCCACTCCTTCATCTCATAAGAATCGCAAGGGTGCGTGCGGGAGACAGAAAGAAGAAATTCTTAGTCAGGTCCGTGAACTGATAAAGTTGGAGCCAGGCTTGATTCACGGACAAGTAGATGCTGAACGACAAGTGCAATATGGAAATTTGTCTACTGGTTTTGAACGTGACGTAGAGGCTAATATGTTTCCTTCCTATGAGAGTAGCACAGCTGAAATTCCCAACATGCAGGCAGGGGTGTTTTGTTGGCATGGAGAAAGCAGTGATCCTGCAAATCAAATTGTTCCTTCTGATACGTCACTGAGAGATTATGGTTTGCTAGTTTCAGCTGAAGATCCAAGTTTTACCATCCCTGGGACTCACGCCAATTGTAACAACCAAGGGAAACCATCAAATTCTTTTCACGCTGAAAACTTATCTCCTACTCCTAAACCTACTCCACATGAGTTAACAAGTCATGAAAGAGATTCAGCATTATTGCGATACAGAGAGAAGAAAAAAACCAGAAGATATGACAAGCACATCAGATATGAATCACGAAAAGTTCGGGCAGAAAGCAGGATGAGAATTAAGGGTCGGTTTGTCAAAGATGAAACACAAAAATAA 1074 0.4525 MSGSPNPNPNSNPNPKPQRTCDYCGDFTALLYCRADSAKLCLFCDRKVHFPNQLFSKHTRSQLCDVCADSPASLLCSTHNSVLCQNCDCQTHNHALSPPHQRTPLHGFSGCPSVPHLLTILGLSEKSLLPTSQIQPLSDFHVWNAPASVGLQDFIASTPSSHKNRKGACGRQKEEILSQVRELIKLEPGLIHGQVDAERQVQYGNLSTGFERDVEANMFPSYESSTAEIPNMQAGVFCWHGESSDPANQIVPSDTSLRDYGLLVSAEDPSFTIPGTHANCNNQGKPSNSFHAENLSPTPKPTPHELTSHERDSALLRYREKKKTRRYDKHIRYESRKVRAESRMRIKGRFVKDETQK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11496g00001 357 MobiDBLite consensus disorder prediction 304 321 - -
Mupr11496g00001 357 CDD Bbox1_BBX-like 21 63 - -
Mupr11496g00001 357 ProSiteProfiles Zinc finger B-box type profile. 16 63 IPR000315 GO:0008270
Mupr11496g00001 357 MobiDBLite consensus disorder prediction 278 303 - -
Mupr11496g00001 357 MobiDBLite consensus disorder prediction 278 329 - -
Mupr11496g00001 357 Pfam CCT motif 311 353 IPR010402 GO:0005515
Mupr11496g00001 357 ProSiteProfiles CCT domain profile. 311 353 IPR010402 GO:0005515
Mupr11496g00001 357 ProSiteProfiles Zinc finger B-box type profile. 59 105 IPR000315 GO:0008270
Mupr11496g00001 357 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 20 353 - -
Mupr11496g00001 357 SMART bboxneu5 16 63 IPR000315 GO:0008270
Mupr11496g00001 357 SMART bboxneu5 64 105 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11496g00001 Mupr-Chr11496 5683 7485 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11496g00001 19 326 C2C2-CO-like Transcription Factor Family AT2G47890 36.810 5.26e-56 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Mupr11496g00001 CCT 3e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11496g00001 - - gmx:100798117 540.036