Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11481g00002 CAGGAGGAGATTCGAAATGCACCTTCTACAAACATGATGATGAATCAGCTGCCGAACCCTAATGATTTGGTCATGAGCACCATGCGAGGAGGGCCTGAAGAAACTCCCAAGCCCCCATCAGCTAATAGACCTCCAGAGAAGAGACAGAGAGTTCCATCTGCTTACAACCGCTTCATCAAGGATGAGATCCAACGTATCAAAGCTGGGAATCCTGATATAAGCCACAGAGAGGCCTTTAGTGCAGCTGCAAAGAATTGGGCCCATTTTCCACACATTCATTTCGGACTTATGCCTGATCATCAACCCGTGAAGAAAGCTAATGTTCGTCAGGAAGCAGAGGACGTGCTTATGAAAGATGGGTTTTTCGCACCGGCTAATTACTTCTTAGTATTACAAGTTGTTAGTTTATGTTACAATCAATGGTGGGAGGGGATTCTGACGAAGTTAGCAGAGATTAGTTCTTCTGAAAATGAAGATGGTTTATTTTCTGTTGAACTGGTCCCAGAATGA 510 0.4431 QEEIRNAPSTNMMMNQLPNPNDLVMSTMRGGPEETPKPPSANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQEAEDVLMKDGFFAPANYFLVLQVVSLCYNQWWEGILTKLAEISSSENEDGLFSVELVPE 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11481g00002 169 MobiDBLite consensus disorder prediction 1 53 - -
Mupr11481g00002 169 Pfam YABBY protein 25 96 IPR006780 GO:0007275
Mupr11481g00002 169 CDD HMG-box_SF 50 86 - -
Mupr11481g00002 169 PANTHER PROTEIN YABBY 6-RELATED 22 108 IPR006780 GO:0007275
Mupr11481g00002 169 FunFam Axial regulator YABBY 41 113 - -
Mupr11481g00002 169 MobiDBLite consensus disorder prediction 1 23 - -
Mupr11481g00002 169 Gene3D High mobility group box domain 33 115 IPR036910 -
Mupr11481g00002 169 SUPERFAMILY HMG-box 37 90 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11481g00002 Mupr-Chr11481 13684 15767 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11481g00002 2 125 C2C2-YABBY Transcription Factor Family AT2G45190 69.531 1.12e-52 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Mupr11481g00002 YABBY 5.1e-40 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11481g00002 K25796 - gmx:100781267 260.766